RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 KCNG2Q9UJ96 466 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 TRAPPC4Q9Y296 219 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 EXOGQ9Y2C4 368 aaKnown RBP15.19■□□□□ 0.02
PHRF1-201ENST00000264555 A0A1W2PNR3 127 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 ABI3BPQ7Z7G0 1075 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 ASH2LQ9UBL3 628 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 B9D1Q9UPM9 204 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 PIGLQ9Y2B2 252 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 HRO43593 1189 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 F10P00742 488 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 RPS27P42677 84 aaKnown RBP15.19■□□□□ 0.02
PHRF1-201ENST00000264555 OR1M1Q8NGA1 313 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 C3orf49Q96BT1 292 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 CNTNAP3BQ96NU0 1288 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 OXGR1Q96P68 337 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 SEC22CQ9BRL7 303 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 IGHV1OR15-9A0A0B4J2B8 117 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 C1QBP02746 253 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 ZNF169Q14929 603 aaPredicted RBP15.19■□□□□ 0.02
PHRF1-201ENST00000264555 TMEM81Q6P7N7 255 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 TMEM185AQ8NFB2 350 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 OR2G2Q8NGZ5 317 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 OR52N5Q8NH56 324 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 TWSG1Q9GZX9 223 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 UNKLQ9H9P5 680 aaKnown RBP15.19■□□□□ 0.02
PHRF1-201ENST00000264555 SLC52A3Q9NQ40 469 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 SLC22A11Q9NSA0 550 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 WNT16Q9UBV4 365 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 BOLA1Q9Y3E2 137 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 R4GMQ9 66 aa15.19■□□□□ 0.02
PHRF1-201ENST00000264555 ANKUB1A6NFN9 424 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 LILRB5O75023 590 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 EPXP11678 715 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 BLOC1S1P78537 153 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 SSX1Q16384 188 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 AKR1C8PQ5T2L2 129 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 CORO6Q6QEF8 472 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 CARFQ8N187 725 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 OR51S1Q8NGJ8 323 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 ZNF845Q96IR2 970 aaPredicted RBP15.18■□□□□ 0.02
PHRF1-201ENST00000264555 RAB9BQ9NP90 201 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 MMP25Q9NPA2 562 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 ZNF780AO75290 641 aaPredicted RBP15.18■□□□□ 0.02
PHRF1-201ENST00000264555 LIMS3P0CW19 117 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 LIMS4P0CW20 117 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 KTI12Q96EK9 354 aaPredicted RBP15.18■□□□□ 0.02
PHRF1-201ENST00000264555 SULT4A1Q9BR01 284 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 MED29Q9NX70 200 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 SGCEO43556 437 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 ABHD16AO95870 558 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 DYRK1AQ13627 763 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 F8W036 122 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 SMLR1H3BR10 107 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 FFAR1O14842 300 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 ARPC3O15145 178 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 EPHA1P21709 976 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 S100A2P29034 98 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 ZFP36L2P47974 494 aaKnown RBP15.18■□□□□ 0.02
PHRF1-201ENST00000264555 FXNQ16595 210 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 OR51E1Q8TCB6 317 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 GLYATL2Q8WU03 294 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 THOC3Q96J01 351 aaKnown RBP15.18■□□□□ 0.02
PHRF1-201ENST00000264555 SIGLEC11Q96RL6 698 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 ERVMER34-1Q9H9K5 563 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 FBXO34Q9NWN3 711 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 C1orf123Q9NWV4 160 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 CTSFQ9UBX1 484 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 PCOLCE2Q9UKZ9 415 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 SLC25A1P53007 311 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 NAXDQ8IW45 347 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 LILRB2Q8N423 598 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 IL1F10Q8WWZ1 152 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 JAM3Q9BX67 310 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 FBXL2Q9UKC9 423 aa15.18■□□□□ 0.02
PHRF1-201ENST00000264555 MN1Q10571 1320 aaPredicted RBP15.17■□□□□ 0.02
PHRF1-201ENST00000264555 ANKRD61A6NGH8 418 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 MCRIP1C9JLW8 97 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 CELA2BP08218 269 aaPredicted RBP15.17■□□□□ 0.02
PHRF1-201ENST00000264555 MYF5P13349 255 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 ZNF141Q15928 474 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.17■□□□□ 0.02
PHRF1-201ENST00000264555 TMEM178AQ8NBL3 297 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.17■□□□□ 0.02
PHRF1-201ENST00000264555 PIGTQ969N2 578 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 FYTTD1Q96QD9 318 aaKnown RBP15.17■□□□□ 0.02
PHRF1-201ENST00000264555 SLCO1C1Q9NYB5 712 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 TNFSF14O43557 240 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 SLC34A2O95436 690 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 ABCD3P28288 659 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 ZNF133P52736 654 aaPredicted RBP15.17■□□□□ 0.02
PHRF1-201ENST00000264555 MFGE8Q08431 387 aaPredicted RBP15.17■□□□□ 0.02
PHRF1-201ENST00000264555 SEC22AQ96IW7 307 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 OBP2BQ9NPH6 170 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 SCN10AQ9Y5Y9 1956 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 IGHV1OR21-1A0A087WYE8 117 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 A0A087WZY1 265 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 NRG2O14511 850 aaPredicted RBP15.17■□□□□ 0.02
PHRF1-201ENST00000264555 CBX7O95931 251 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 CCL7P80098 99 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 SEMA6DQ8NFY4 1073 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms