RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 SDC1P18827 310 aa10.47□□□□□ -0.73
PTPN4-201ENST00000263708 RFC3P40938 356 aa10.47□□□□□ -0.73
PTPN4-201ENST00000263708 LAX1Q8IWV1 398 aa10.47□□□□□ -0.73
PTPN4-201ENST00000263708 CMTM4Q8IZR5 234 aa10.47□□□□□ -0.73
PTPN4-201ENST00000263708 DRAXINQ8NBI3 349 aaPredicted RBP10.47□□□□□ -0.73
PTPN4-201ENST00000263708 LFNGQ8NES3 379 aa10.47□□□□□ -0.73
PTPN4-201ENST00000263708 OR51F2Q8NH61 342 aa10.47□□□□□ -0.73
PTPN4-201ENST00000263708 OR5K2Q8NHB8 316 aa10.47□□□□□ -0.73
PTPN4-201ENST00000263708 FGF13Q92913 245 aa10.47□□□□□ -0.73
PTPN4-201ENST00000263708 ZNF85Q03923 595 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 LEXMQ3ZCV2 418 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 ZNF620Q6ZNG0 422 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 MFSD9Q8NBP5 474 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 OR2A1Q8NGT9 310 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 OR13D1Q8NGV5 346 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 ADGRB2O60241 1585 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 A0A096LPE4 126 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 A0A1W2PPZ6 126 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 SERINC4A6NH21 518 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 SHISA7A6NL88 538 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 ZNF487B1APH4 448 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 C21orf33P30042 268 aaPredicted RBP10.46□□□□□ -0.73
PTPN4-201ENST00000263708 NKX2-1P43699 371 aaPredicted RBP10.46□□□□□ -0.73
PTPN4-201ENST00000263708 SLC5A12Q1EHB4 618 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 OR4A4PQ8NGN8 299 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 ST8SIA4Q92187 359 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 GHSRQ92847 366 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 C12orf42Q96LP6 360 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 KLK4Q9Y5K2 254 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 H3BNC9 293 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 FABP7O15540 132 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 SELENOFO60613 162 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 FGF7P21781 194 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 BCL7AQ4VC05 210 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 ANGPTL5Q86XS5 388 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 C17orf78Q8N4C9 275 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 OR6K3Q8NGY3 331 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 ACY3Q96HD9 319 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 SPACA1Q9HBV2 294 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 MOKQ9UQ07 419 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 ETV7Q9Y603 341 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 H3BVH4 76 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 IL2RAP01589 272 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 MAP2K6P52564 334 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 FOXA1P55317 472 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 PM20D1Q6GTS8 502 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 LCN15Q6UWW0 184 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 YRDCQ86U90 279 aaKnown RBP10.46□□□□□ -0.73
PTPN4-201ENST00000263708 OR10Z1Q8NGY1 313 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 PLA2G12AQ9BZM1 189 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 SLC2A9Q9NRM0 540 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 DCCP43146 1447 aa10.46□□□□□ -0.73
PTPN4-201ENST00000263708 A0A0B4J203 849 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 AKR7A3O95154 331 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 EXT1Q16394 746 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 TOR2AQ5JU69 321 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 FAM3DQ96BQ1 224 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 RASD2Q96D21 266 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 DHCR7Q9UBM7 475 aaKnown RBP10.46□□□□□ -0.74
PTPN4-201ENST00000263708 MON2Q7Z3U7 1717 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 GFRA2O00451 464 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 GABRB3P28472 473 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 TNFSF8P32971 234 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 AKR1C3P42330 323 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 MS4A2Q01362 244 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 C6orf15Q6UXA7 325 aaPredicted RBP10.46□□□□□ -0.74
PTPN4-201ENST00000263708 NKAIN3Q8N8D7 197 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 NPEPL1Q8NDH3 523 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 OR13C8Q8NGS7 320 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 EVA1AQ9H8M9 152 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 SLC17A4Q9Y2C5 497 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 CSAG2Q9Y5P2 127 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 OR2T7P0C7T2 308 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 PPIAP62937 165 aaKnown RBP10.46□□□□□ -0.74
PTPN4-201ENST00000263708 CLEC12BQ2HXU8 276 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 BTLAQ7Z6A9 289 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 GABARAPL1Q9H0R8 117 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 UGT2A1Q9Y4X1 527 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 HELTA6NFD8 242 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 MRPS14O60783 128 aaKnown RBP10.46□□□□□ -0.74
PTPN4-201ENST00000263708 SRMP19623 302 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 HOXA4Q00056 320 aaPredicted RBP10.46□□□□□ -0.74
PTPN4-201ENST00000263708 ALKBH1Q13686 389 aaKnown RBP10.46□□□□□ -0.74
PTPN4-201ENST00000263708 DEFB109BQ30KR1 87 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 MISP3Q96FF7 219 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 DPH3Q96FX2 82 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 CRLF2Q9HC73 371 aa10.46□□□□□ -0.74
PTPN4-201ENST00000263708 MN1Q10571 1320 aaPredicted RBP10.46□□□□□ -0.74
PTPN4-201ENST00000263708 SMAD6O43541 496 aaKnown RBP10.45□□□□□ -0.74
PTPN4-201ENST00000263708 GASTP01350 101 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 SLC6A11P48066 632 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 HNRNPA1L2Q32P51 320 aaKnown RBP10.45□□□□□ -0.74
PTPN4-201ENST00000263708 FAM162BQ5T6X4 162 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 ETFRF1Q6IPR1 90 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 SFXN4Q6P4A7 337 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 C5orf46Q6UWT4 87 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 GRINAQ7Z429 371 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 DTD1Q8TEA8 209 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 GPR78Q96P69 363 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 TNFRSF13CQ96RJ3 184 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 260.1 ms