RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 FGFBP3Q8TAT2 258 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 LINC01560Q8TB33 94 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 APH1BQ8WW43 257 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 HTRA1Q92743 480 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 RFKQ969G6 155 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 Q96MT0 163 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 ANKRD60Q9BZ19 345 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 RERGLQ9H628 205 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 EMC7Q9NPA0 242 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 NGBQ9NPG2 151 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 CRIM1Q9NZV1 1036 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 WARS2Q9UGM6 360 aaKnown RBP12.3□□□□□ -0.44
VPS25-201ENST00000253794 ATPIF1Q9UII2 106 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 RAB26Q9ULW5 256 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 LHFPL6Q9Y693 200 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 ICE1Q9Y2F5 2266 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 A1L4Q6 167 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 FAM171A2A8MVW0 826 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 WBP4O75554 376 aaKnown RBP12.29□□□□□ -0.44
VPS25-201ENST00000253794 HLA-HP01893 362 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 GNAO1P09471 354 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 ZNF14P17017 642 aaPredicted RBP12.29□□□□□ -0.44
VPS25-201ENST00000253794 ENTPD1P49961 510 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 RAB1AP62820 205 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 SCRN3Q0VDG4 424 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 MEP1BQ16820 701 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 KLHL12Q53G59 568 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 TMEM53Q6P2H8 277 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 LYPD4Q6UWN0 246 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 BCDIN3DQ7Z5W3 292 aaKnown RBP12.29□□□□□ -0.44
VPS25-201ENST00000253794 C8orf59Q8N0T1 100 aaPredicted RBP12.29□□□□□ -0.44
VPS25-201ENST00000253794 OR6K6Q8NGW6 343 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 OTULINQ96BN8 352 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 FOXN4Q96NZ1 517 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 ZNF184Q99676 751 aaPredicted RBP12.29□□□□□ -0.44
VPS25-201ENST00000253794 KCNN2Q9H2S1 579 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 NOX3Q9HBY0 568 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 NPAP1Q9NZP6 1156 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 H2AFY2Q9P0M6 372 aaPredicted RBP12.29□□□□□ -0.44
VPS25-201ENST00000253794 PLEKHB1Q9UF11 243 aaPredicted RBP12.29□□□□□ -0.44
VPS25-201ENST00000253794 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.29□□□□□ -0.44
VPS25-201ENST00000253794 TIMM10BQ9Y5J6 103 aa12.29□□□□□ -0.44
VPS25-201ENST00000253794 FAM221AA4D161 298 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 SNTNA6NMZ2 147 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 ENTPD6O75354 484 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 CLIC3O95833 236 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 HLA-DQA2P01906 255 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 COX5BP10606 129 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 ZNF823P16415 610 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 ZNF32P17041 273 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 MYF6P23409 242 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 CDH11P55287 796 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 POU4F2Q12837 409 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 C6orf52Q5T4I8 152 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 SP5Q6BEB4 398 aaPredicted RBP12.28□□□□□ -0.44
VPS25-201ENST00000253794 SLC18B1Q6NT16 456 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 RHOUQ7L0Q8 258 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 SHFQ7M4L6 423 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 MDP1Q86V88 176 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 LRRC18Q8N456 261 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 ZNF511Q8NB15 262 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 OR10H5Q8NGA6 315 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 ZMYND19Q96E35 227 aaPredicted RBP12.28□□□□□ -0.44
VPS25-201ENST00000253794 INTS14Q96SY0 518 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 MNTQ99583 582 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 OR2H1Q9GZK4 316 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 WNT5BQ9H1J7 359 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 C1orf198Q9H425 327 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 WDR76Q9H967 626 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 CCNB1IP1Q9NPC3 277 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 RASSF1Q9NS23 344 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 MRPS18AQ9NVS2 196 aaKnown RBP12.28□□□□□ -0.44
VPS25-201ENST00000253794 CLN6Q9NWW5 311 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 DNAJC27Q9NZQ0 273 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 ASH2LQ9UBL3 628 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 DOPEY2Q9Y3R5 2298 aa12.28□□□□□ -0.44
VPS25-201ENST00000253794 A0A1W2PR80 420 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 TVP23AA6NH52 213 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 DEFB108AA8MXU0 73 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 SIAH2O43255 324 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 TMCC2O75069 709 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 RAB36O95755 333 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 SERPINA5P05154 406 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 PSKH1P11801 424 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 CD79AP11912 226 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 LOXP28300 417 aaPredicted RBP12.27□□□□□ -0.45
VPS25-201ENST00000253794 CAPZA2P47755 286 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 RPS7P62081 194 aaKnown RBP12.27□□□□□ -0.45
VPS25-201ENST00000253794 TUBA1BP68363 451 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 TUBA4AP68366 448 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 ADAM8P78325 824 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 PSG4Q00888 419 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 IL5RAQ01344 420 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 SNTB1Q13884 538 aaKnown RBP12.27□□□□□ -0.45
VPS25-201ENST00000253794 BEX5Q5H9J7 111 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 TMEM108Q6UXF1 575 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 TUBA1AQ71U36 451 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 SLC16A9Q7RTY1 509 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 THAP5Q7Z6K1 395 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 ZNF584Q8IVC4 421 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms