RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 CST11Q9H112 138 aa15.97■□□□□ 0.15
CDKN1B-201ENST00000228872 CSAG2Q9Y5P2 127 aa15.97■□□□□ 0.15
CDKN1B-201ENST00000228872 SPTBN5Q9NRC6 3674 aaKnown RBP15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 C9orf170A2RU37 121 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 TMEM212A6NML5 194 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 SFTA3P0C7M3 94 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 PEBP1P30086 187 aaKnown RBP15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 GABRA3P34903 492 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 CDKN2AP42771 156 aaKnown RBP15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 F2RL1P55085 397 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 CDK3Q00526 305 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 FABP9Q0Z7S8 132 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 PNLIPRP3Q17RR3 467 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 DRAM2Q6UX65 266 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 RHOUQ7L0Q8 258 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 GAL3ST3Q96A11 431 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 CLCC1Q96S66 551 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 GAL3ST1Q99999 423 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 HRH4Q9H3N8 390 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 SEC61A2Q9H9S3 476 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 DNAJB12Q9NXW2 375 aaKnown RBP15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 METTL1Q9UBP6 276 aaKnown RBP15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 RPH3AQ9Y2J0 694 aaPredicted RBP15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 EYSQ5T1H1 3165 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 APEHP13798 732 aaKnown RBP15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 WASP42768 502 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 ISXQ2M1V0 245 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 KIRREL2Q6UWL6 708 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 PRSS35Q8N3Z0 413 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 OR52E1Q8NGJ3 308 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 PHB2Q99623 299 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 LPAR3Q9UBY5 353 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 PCDHGA1Q9Y5H4 931 aa15.96■□□□□ 0.15
CDKN1B-201ENST00000228872 LATO43561 262 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 DNAJB6O75190 326 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 CRHP06850 196 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 IGFBP4P22692 258 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 PSMB6P28072 239 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 CAV2P51636 162 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 ELAVL1Q15717 326 aaKnown RBP15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 RNF212Q495C1 297 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 ACER2Q5QJU3 275 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 FAM166AQ6J272 317 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 ETV3LQ6ZN32 361 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 SLC29A4Q7RTT9 530 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 CDC20BQ86Y33 519 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 NUDCD2Q8WVJ2 157 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 ZNF285Q96NJ3 590 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 NAA11Q9BSU3 229 aaPredicted RBP15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 CHMP1AQ9HD42 196 aaPredicted RBP15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 PRMT8Q9NR22 394 aaPredicted RBP15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 IGLON5A6NGN9 336 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 ELOA3DA6NLF2 546 aaPredicted RBP15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 TXNL1O43396 289 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 PRF1P14222 555 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 RCC1P18754 421 aaPredicted RBP15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 AGAP20933 346 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 DRD3P35462 400 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 ELOCQ15369 112 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 NKPD1Q17RQ9 610 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 ELOA3BQ3SY89 546 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 VN1R4Q7Z5H5 301 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 EXD3Q8N9H8 876 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 ELOA3Q8NG57 546 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 TSEN15Q8WW01 171 aaKnown RBP15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 PAPOLGQ9BWT3 736 aaKnown RBP15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 RAB11FIP5Q9BXF6 653 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 SLCO5A1Q9H2Y9 848 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 KLK13Q9UKR3 277 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 SLC22A7Q9Y694 548 aa15.95■□□□□ 0.14
CDKN1B-201ENST00000228872 RNASEK-C17orf49H0YIS7 233 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 ADH1BP00325 375 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 FBP1P09467 338 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 CTHP32929 405 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 KIR3DL2P43630 455 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 SKP1P63208 163 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 EXOSC7Q15024 291 aaKnown RBP15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 ZNF561Q8N587 486 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 OR4E2Q8NGC2 313 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 RRNAD1Q96FB5 475 aaKnown RBP15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 SLC41A2Q96JW4 573 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 TEX101Q9BY14 249 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 LAT2Q9GZY6 243 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 PCOLCE2Q9UKZ9 415 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 SCN3AQ9NY46 2000 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 TRBV6-7A0A0A0MS04 114 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 TTLL8A6PVC2 850 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 SLC25A1P53007 311 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 IL13RA1P78552 427 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 RUNX2Q13950 521 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 AKIRIN2Q53H80 203 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 ZNF425Q6IV72 752 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 ULK3Q6PHR2 472 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 KCTD9Q7L273 389 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 JAZF1Q86VZ6 243 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 CASTOR1Q8WTX7 329 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 PMM1Q92871 262 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 TMEM74BQ9NUR3 256 aa15.94■□□□□ 0.14
CDKN1B-201ENST00000228872 LOC100509620A0A075B734 347 aa15.93■□□□□ 0.14
CDKN1B-201ENST00000228872 TVP23AA6NH52 213 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms