RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 EIF2DP41214 584 aaKnown RBP12.12□□□□□ -0.47
COL1A1-201ENST00000225964 RAP2BP61225 183 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 ADIRFQ15847 76 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 CRYGNQ8WXF5 182 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 DHRS4Q9BTZ2 278 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 BCO1Q9HAY6 547 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 IDSB3KWA1 339 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 DSCR3O14972 297 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 CRYAAP02489 173 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 MYF5P13349 255 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 TRMT12Q53H54 448 aaKnown RBP12.12□□□□□ -0.47
COL1A1-201ENST00000225964 ANKRD61A6NGH8 418 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 KLK10O43240 276 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 METTL15P1P0C7V9 234 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 NPPBP16860 134 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 MAGEB1P43366 347 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 CCL7P80098 99 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 KDM4DQ6B0I6 523 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 USP51Q70EK9 711 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 SLC16A11Q8NCK7 471 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 NRG4Q8WWG1 115 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 SARGQ9BW04 601 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 SLC5A6Q9Y289 635 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 PLPP1O14494 284 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 SCG5P05408 212 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 ELK1P19419 428 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 CORO6Q6QEF8 472 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 CDC20BQ86Y33 519 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 OR51E1Q8TCB6 317 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 SLCO4A1Q96BD0 722 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 OR11A1Q9GZK7 315 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 TOPAZ1Q8N9V7 1692 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 C1orf87Q8N0U7 546 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 OR2L13Q8N349 312 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 OR5M9Q8NGP3 310 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 OR2AE1Q8NHA4 323 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 SNX11Q9Y5W9 270 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 PHIPQ8WWQ0 1821 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 CPEP16870 476 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 FKBP2P26885 142 aaKnown RBP12.11□□□□□ -0.47
COL1A1-201ENST00000225964 LAP3P28838 519 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 NOVA1P51513 510 aaKnown RBP12.11□□□□□ -0.47
COL1A1-201ENST00000225964 HCCSP53701 268 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 ZNF266Q14584 549 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 TFAP2EQ6VUC0 442 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 OR10AD1Q8NGE0 317 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 TRMT61AQ96FX7 289 aaKnown RBP12.11□□□□□ -0.47
COL1A1-201ENST00000225964 Q96M85 177 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 RANGRFQ9HD47 186 aaPredicted RBP12.11□□□□□ -0.47
COL1A1-201ENST00000225964 TAS2R5Q9NYW4 299 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 POLDIP2Q9Y2S7 368 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 M0QZ24 198 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 HLA-HP01893 362 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 RBP2P50120 134 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 TRNP1Q6NT89 227 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 KDF1Q8NAX2 398 aaPredicted RBP12.11□□□□□ -0.47
COL1A1-201ENST00000225964 FYTTD1Q96QD9 318 aaKnown RBP12.11□□□□□ -0.47
COL1A1-201ENST00000225964 ZC3H12DA2A288 527 aaKnown RBP12.11□□□□□ -0.47
COL1A1-201ENST00000225964 GPR37O15354 613 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 HRO43593 1189 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 OR2J2O76002 312 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 C20orf85Q9H1P6 137 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 NARFLQ9H6Q4 476 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 SLC16A6O15403 523 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 IAH1Q2TAA2 248 aaPredicted RBP12.11□□□□□ -0.47
COL1A1-201ENST00000225964 FCRL1Q96LA6 429 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 NIPSNAP1Q9BPW8 284 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 CEPT1Q9Y6K0 416 aa12.11□□□□□ -0.47
COL1A1-201ENST00000225964 SLC22A20A6NK97 555 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 TARM1B6A8C7 271 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 ARPC3O15145 178 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 FPR3P25089 353 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 CLDN15P56746 228 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 DHRS9Q9BPW9 319 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 ZDHHC5Q9C0B5 715 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 EXO1Q9UQ84 846 aaKnown RBP12.1□□□□□ -0.47
COL1A1-201ENST00000225964 SLCO1B1Q9Y6L6 691 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 MEIKINA0A087WXM9 373 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 POM121BA6NF01 834 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 CTDSP2O14595 271 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 ENTHD1Q8IYW4 607 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 SVBPQ8N300 66 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 NT5DC2Q9H857 520 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 CTSFQ9UBX1 484 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 ALPLP05186 524 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 TMEM41BQ5BJD5 291 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 WDR88Q6ZMY6 472 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 MORN4Q8NDC4 146 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 OR52N5Q8NH56 324 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 MS4A6EQ96DS6 147 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 CLDN24A6NM45 220 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 FAM71E1Q6IPT2 247 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 LGI3Q8N145 548 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 FBXL14Q8N1E6 418 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 KCTD12Q96CX2 325 aaKnown RBP12.1□□□□□ -0.47
COL1A1-201ENST00000225964 SLC23A1Q9UHI7 598 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 ZNF346Q9UL40 294 aaKnown RBP12.1□□□□□ -0.47
COL1A1-201ENST00000225964 SYT5O00445 386 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 OR5G3P0C626 314 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 BTG2P78543 158 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms