RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FAM3DQ96BQ1 224 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 KXD1Q9BQD3 176 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 TGIF2Q9GZN2 237 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 RXFP3Q9NSD7 469 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 MOSPD3O75425 235 aa12.46□□□□□ -0.42
SCARB2-227ENST00000640957 RAB6AP20340 208 aa12.46□□□□□ -0.42
SCARB2-227ENST00000640957 ITGA3P26006 1051 aa12.46□□□□□ -0.42
SCARB2-227ENST00000640957 SGCAQ16586 387 aa12.46□□□□□ -0.42
SCARB2-227ENST00000640957 ZNF658BQ4V348 819 aaPredicted RBP12.46□□□□□ -0.42
SCARB2-227ENST00000640957 KLHL26Q53HC5 615 aa12.46□□□□□ -0.42
SCARB2-227ENST00000640957 GLYATL3Q5SZD4 288 aa12.46□□□□□ -0.42
SCARB2-227ENST00000640957 C7orf61Q8IZ16 206 aa12.46□□□□□ -0.42
SCARB2-227ENST00000640957 NOTCH4Q99466 2003 aa12.46□□□□□ -0.42
SCARB2-227ENST00000640957 C17orf51A8MQB3 221 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 HTR3BO95264 441 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 CYB5AP00167 134 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 TIMP1P01033 207 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 RORAP35398 523 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 P2RY2P41231 377 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 NR0B1P51843 470 aaKnown RBP12.45□□□□□ -0.42
SCARB2-227ENST00000640957 S100A10P60903 97 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 ZNF77Q15935 545 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 HNRNPA1L2Q32P51 320 aaKnown RBP12.45□□□□□ -0.42
SCARB2-227ENST00000640957 FAM220AQ7Z4H9 259 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 LRRC25Q8N386 305 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-227ENST00000640957 CSNK1A1LQ8N752 337 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 CLEC1AQ8NC01 280 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 OR5M8Q8NGP6 311 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 LMLNQ96KR4 655 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 ZNF736B4DX44 427 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-227ENST00000640957 OIP5O43482 229 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 LRP3O75074 770 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 WNT11O96014 354 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 CA3P07451 260 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 ERCC1P07992 297 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-227ENST00000640957 CT62P0C5K7 136 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 ABOP16442 354 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 AGTR1P30556 359 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 SERPINF1P36955 418 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 KIRREL2Q6UWL6 708 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 DMRTC2Q8IXT2 367 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-227ENST00000640957 SP7Q8TDD2 431 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-227ENST00000640957 AMDHD2Q9Y303 409 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 MTCL1Q9Y4B5 1905 aaKnown RBP12.45□□□□□ -0.42
SCARB2-227ENST00000640957 C11orf98E9PRG8 122 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 MED6O75586 246 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 H2AFB1P0C5Y9 115 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 DIO1P49895 249 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 OR2B11Q5JQS5 317 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 ARHGAP11AQ6P4F7 1023 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 GALNTL5Q7Z4T8 443 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 MARCH3Q86UD3 253 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 NPEPL1Q8NDH3 523 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 TMEM52Q8NDY8 209 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 OR51F2Q8NH61 342 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 SPACA5Q96QH8 159 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 PRO1933Q9H354 126 aa12.45□□□□□ -0.42
SCARB2-227ENST00000640957 MRPS2Q9Y399 296 aaKnown RBP12.45□□□□□ -0.42
SCARB2-227ENST00000640957 EDDM13A0A1B0GTR0 161 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 A0A1W2PPC1 479 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 LMX1BO60663 402 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 LYPD3O95274 346 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 NID1P14543 1247 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 CD53P19397 219 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 CDK3Q00526 305 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 FAM76BQ5HYJ3 339 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 CORO6Q6QEF8 472 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 OR2L5Q8NG80 312 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 SLC25A43Q8WUT9 341 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-227ENST00000640957 SEH1LQ96EE3 360 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 ZNF514Q96K75 400 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-227ENST00000640957 MEGF10Q96KG7 1140 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 NRIP2Q9BQI9 281 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 LAMP5Q9UJQ1 280 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 HOXB1P14653 301 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-227ENST00000640957 TSFMP43897 325 aaKnown RBP12.44□□□□□ -0.42
SCARB2-227ENST00000640957 FHL1Q13642 323 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 ALKBH1Q13686 389 aaKnown RBP12.44□□□□□ -0.42
SCARB2-227ENST00000640957 UNQ9370/PRO34162Q6UXP9 181 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 TMEM64Q6YI46 380 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 TMPRSS11FQ6ZWK6 438 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 OR4K17Q8NGC6 315 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 OR13C8Q8NGS7 320 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 CCDC74AQ96AQ1 378 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 FOXRED1Q96CU9 486 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-227ENST00000640957 IER2Q9BTL4 223 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 SYT4Q9H2B2 425 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 CHMP1AQ9HD42 196 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-227ENST00000640957 THSD7BQ9C0I4 1608 aa12.44□□□□□ -0.42
SCARB2-227ENST00000640957 CXorf65A6NEN9 183 aa12.43□□□□□ -0.42
SCARB2-227ENST00000640957 DUXAA6NLW8 204 aa12.43□□□□□ -0.42
SCARB2-227ENST00000640957 HRKO00198 91 aa12.43□□□□□ -0.42
SCARB2-227ENST00000640957 CLEC3AO75596 197 aa12.43□□□□□ -0.42
SCARB2-227ENST00000640957 NDUFB2O95178 105 aa12.43□□□□□ -0.42
SCARB2-227ENST00000640957 TXNDC12O95881 172 aa12.43□□□□□ -0.42
SCARB2-227ENST00000640957 PMP2P02689 132 aa12.43□□□□□ -0.42
SCARB2-227ENST00000640957 MEP1BQ16820 701 aa12.43□□□□□ -0.42
SCARB2-227ENST00000640957 MISPQ8IVT2 679 aa12.43□□□□□ -0.42
SCARB2-227ENST00000640957 BAP18Q8IXM2 172 aa12.43□□□□□ -0.42
SCARB2-227ENST00000640957 ZNF619Q8N2I2 560 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms