RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CAPSLQ8WWF8 208 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 GCDHQ92947 438 aaPredicted RBP12.19□□□□□ -0.46
NEK3-205ENST00000610828 TCEAL3Q969E4 200 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 ZNF486Q96H40 463 aaPredicted RBP12.19□□□□□ -0.46
NEK3-205ENST00000610828 OR5B2Q96R09 309 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 MRI1Q9BV20 369 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 HS3ST3B1Q9Y662 390 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 TMEM127O75204 238 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 CALCBP10092 127 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 SFTPDP35247 375 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 RGS19P49795 217 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 FAM205BPQ63HN1 556 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 NDUFAF7Q7L592 441 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 DND1Q8IYX4 353 aaKnown RBP12.19□□□□□ -0.46
NEK3-205ENST00000610828 TMEM105Q8N8V8 129 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 SMIM4Q8WVI0 70 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 MCHR2Q969V1 340 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 S100A16Q96FQ6 103 aaKnown RBP12.19□□□□□ -0.46
NEK3-205ENST00000610828 IMMP1LQ96LU5 166 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 NECAB3Q96P71 396 aaPredicted RBP12.19□□□□□ -0.46
NEK3-205ENST00000610828 ZNF700Q9H0M5 742 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 B3GAT1Q9P2W7 334 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 FBXL3Q9UKT7 428 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 EML6Q6ZMW3 1958 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 TRAV6A0A075B6T7 132 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 A0A1W2PNV4 684 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 CTDSPLO15194 276 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 LDOC1O95751 146 aaPredicted RBP12.18□□□□□ -0.46
NEK3-205ENST00000610828 PTGS2P35354 604 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 EXT1Q16394 746 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 UEVLDQ8IX04 471 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 OR2Y1Q8NGV0 311 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 DPAGT1Q9H3H5 408 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 TMEM165Q9HC07 324 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 NUDT15Q9NV35 164 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 MED12Q93074 2177 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 GSTZ1O43708 216 aaPredicted RBP12.18□□□□□ -0.46
NEK3-205ENST00000610828 KHDRBS3O75525 346 aaKnown RBP12.18□□□□□ -0.46
NEK3-205ENST00000610828 GDNFP39905 211 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 ART1P52961 327 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 TMEM69Q5SWH9 247 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 CORO6Q6QEF8 472 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 OPN5Q6U736 354 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 CATSPERDQ86XM0 798 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 FADS6Q8N9I5 356 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 THRSPQ92748 146 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 RBP7Q96R05 134 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 FANCFQ9NPI8 374 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 DHDHQ9UQ10 334 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 EMC9Q9Y3B6 208 aa12.18□□□□□ -0.46
NEK3-205ENST00000610828 MASP2O00187 686 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 RAB40ALP0C0E4 278 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 GIFP27352 417 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 RPS15P62841 145 aaKnown RBP12.17□□□□□ -0.46
NEK3-205ENST00000610828 MRPS15P82914 257 aaKnown RBP12.17□□□□□ -0.46
NEK3-205ENST00000610828 CAMK2DQ13557 499 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 TMEM176BQ3YBM2 270 aaPredicted RBP12.17□□□□□ -0.46
NEK3-205ENST00000610828 CCDC157Q569K6 752 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 C1QTNF12Q5T7M4 302 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 BCL2L15Q5TBC7 163 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 LRFN4Q6PJG9 635 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 ZNF227Q86WZ6 799 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 OR11G2Q8NGC1 345 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 RHBDD1Q8TEB9 315 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 RAB40AQ8WXH6 277 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 MIB2Q96AX9 1013 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 CDCP1Q9H5V8 836 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 ZNF160Q9HCG1 818 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 RABL2AQ9UBK7 228 aaPredicted RBP12.17□□□□□ -0.46
NEK3-205ENST00000610828 RABL2BQ9UNT1 228 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 ETV7Q9Y603 341 aa12.17□□□□□ -0.46
NEK3-205ENST00000610828 NSG1A0A0A6YYJ2 146 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 EIF1AYO14602 144 aaKnown RBP12.16□□□□□ -0.46
NEK3-205ENST00000610828 DOK2O60496 412 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 MT-ND4P03905 459 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 CDK2P24941 298 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 FOLR3P41439 243 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 SNTA1Q13424 505 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 SNTB2Q13425 540 aaKnown RBP12.16□□□□□ -0.46
NEK3-205ENST00000610828 SF3B4Q15427 424 aaKnown RBP eCLIP12.16□□□□□ -0.46
NEK3-205ENST00000610828 TMEM225Q6GV28 225 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 PLCZ1Q86YW0 608 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 GLB1L2Q8IW92 636 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 ST7LQ8TDW4 575 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 HAVCR1Q96D42 359 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 OR2B2Q9GZK3 357 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 CENPMQ9NSP4 180 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 MCUBQ9NWR8 336 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 MRPL15Q9P015 296 aaKnown RBP12.16□□□□□ -0.46
NEK3-205ENST00000610828 STEAP1Q9UHE8 339 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 FBXO4Q9UKT5 387 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 FOXJ3Q9UPW0 622 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 R4GMQ9 66 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 AQP8O94778 261 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 GP1BAP07359 652 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 GSTT2P0CG29 244 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 GSTT2BP0CG30 244 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 CCL3P10147 92 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 RCVRNP35243 200 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 EIF1P41567 113 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms