RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 MGAM2Q2M2H8 2515 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 F13BP05160 661 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 EGR1P18146 543 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 ARHGDIAP52565 204 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 TAS2R41P59536 307 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 ANKDD1AQ495B1 522 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 ARMC4Q5T2S8 1044 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 FAM205BPQ63HN1 556 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 ERICH5Q6P6B1 374 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 SYT9Q86SS6 491 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 LRRC18Q8N456 261 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 SYT14Q8NB59 555 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 ICA1LQ8NDH6 482 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 TMEM239Q8WW34 195 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 MARS2Q96GW9 593 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 POM121L2Q96KW2 1035 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 ATP6V1G3Q96LB4 118 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 TSPAN32Q96QS1 320 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 TMPRSS13Q9BYE2 586 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 TXNIPQ9H3M7 391 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 RIMS3Q9UJD0 308 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 SH3GLB1Q9Y371 365 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 MED31Q9Y3C7 131 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 TIMM10BQ9Y5J6 103 aa15.15■□□□□ 0.02
SHKBP1-227ENST00000602011 LOC105371242A0A075B767 164 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 FOXH1O75593 365 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 ADRA2CP18825 462 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 CCNOP22674 350 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 CPT2P23786 658 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 MMP15P51511 669 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 TSTQ16762 297 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 AVPI1Q5T686 147 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 C1orf229Q6ZS94 237 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 BPIFB2Q8N4F0 458 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 ST7LQ8TDW4 575 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 CCL17Q92583 94 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 GAL3ST1Q99999 423 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 ECSITQ9BQ95 431 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 OR51B6Q9H340 312 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 C7orf69Q9H7B7 122 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 KLHL21Q9UJP4 597 aa15.14■□□□□ 0.01
SHKBP1-227ENST00000602011 C5orf49A4QMS7 147 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 AVPP01185 164 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 IGHV1-46P01743 117 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 CD55P08174 381 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 CST2P09228 141 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 ZNF32P17041 273 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 AQP2P41181 271 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 GZMMP51124 257 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 ERVS71-1P61550 626 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 SELPLGQ14242 412 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 SGCAQ16586 387 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 COQ5Q5HYK3 327 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 RBMS3Q6XE24 437 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 OR8J3Q8NGG0 315 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 KLF14Q8TD94 323 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 NMD3Q96D46 503 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 MAGEB18Q96M61 343 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 DDX28Q9NUL7 540 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 INTS9Q9NV88 658 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 HIF3AQ9Y2N7 669 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 WNK2Q9Y3S1 2297 aa15.13■□□□□ 0.01
SHKBP1-227ENST00000602011 A6NIZ1 184 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 UBOX5O94941 541 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 RAP1BP61224 184 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 RAP1AP62834 184 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 PSG4Q00888 419 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 CD47Q08722 323 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 ST3GAL3Q11203 375 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 ALG10Q5BKT4 473 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 NANOGP8Q6NSW7 305 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 SLC25A47Q6Q0C1 308 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 TSPYL5Q86VY4 417 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 NKAIN4Q8IVV8 208 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 POP5Q969H6 163 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 NABP1Q96AH0 204 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 COG8Q96MW5 612 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 GPA33Q99795 319 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 ZMAT3Q9HA38 289 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 ARGLU1Q9NWB6 273 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 NDRG4Q9ULP0 352 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 UGT2A1Q9Y4X1 527 aa15.12■□□□□ 0.01
SHKBP1-227ENST00000602011 C12orf71A8MTZ7 269 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 SPRY3O43610 288 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 COX5BP10606 129 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 TNFRSF1AP19438 455 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 TNFSF4P23510 183 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 RPL27P61353 136 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 FOXL1Q12952 345 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 LAPTM4AQ15012 233 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 CALHM3Q86XJ0 350 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 SPICQ8N5J4 248 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 SLC25A40Q8TBP6 338 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 TMEM255BQ8WV15 326 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 HDAC2Q92769 488 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 OR2H1Q9GZK4 316 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 OR2J1Q9GZK6 312 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 MAN2C1Q9NTJ4 1040 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 TBCCD1Q9NVR7 557 aa15.11■□□□□ 0.01
SHKBP1-227ENST00000602011 POLR3KQ9Y2Y1 108 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms