RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CLPXO76031 633 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 HLA-DPB1P04440 258 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 GALP22466 123 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 TRAM1Q15629 374 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 MEP1BQ16820 701 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 CCDC92Q53HC0 331 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 DMKNQ6E0U4 476 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 RPL22L1Q6P5R6 122 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 INO80CQ6PI98 192 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 CHMP1BQ7LBR1 199 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 TM9SF2Q99805 663 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 MRM2Q9UI43 246 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 ST6GALNAC2Q9UJ37 374 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 MED12Q93074 2177 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 IGKV3D-15A0A087WSY6 115 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 HSPB2A8KAH6 182 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 PRR32B1ATL7 298 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 GPR171O14626 319 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 CD1AP06126 327 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 PSKH1P11801 424 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 FGF9P31371 208 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 TGFBR1P36897 503 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 RPS27P42677 84 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 TGM4P49221 684 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 HSPB2Q16082 182 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 C10orf128Q5T292 105 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 ARL9Q6T311 187 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 Q6ZS92 163 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 C20orf196Q8IYI0 205 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 YIPF7Q8N8F6 280 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 OR10H5Q8NGA6 315 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 C11orf40Q8WZ69 217 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 WDYHV1Q96HA8 205 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 TMED9Q9BVK6 235 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 CDADC1Q9BWV3 514 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 RNF167Q9H6Y7 350 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 ACOXLQ9NUZ1 547 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 TXNL4BQ9NX01 149 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 SPRR3Q9UBC9 169 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 FOXD3Q9UJU5 478 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 GSTK1Q9Y2Q3 226 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 A0A1W2PPL8 197 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 SLC43A1O75387 559 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 SELENOPP49908 381 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 FABP5Q01469 135 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 EIF2B1Q14232 305 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 KCNMB1Q16558 191 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 DGUOKQ16854 277 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 KCTD18Q6PI47 426 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 AAED1Q7RTV5 226 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 RNF128Q8TEB7 428 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 TRMT61AQ96FX7 289 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 DCBLD2Q96PD2 775 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 OR8B4Q96RC9 309 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 SIAEQ9HAT2 523 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 ING1Q9UK53 422 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 IKZF2Q9UKS7 526 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 GRIP1Q9Y3R0 1128 aa15.65■□□□□ 0.1
SHKBP1-224ENST00000600718 CNTRLQ7Z7A1 2325 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 A0A1B0GVC2 190 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 J3QRK9 145 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 PSMD9O00233 223 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 LRRTM2O43300 516 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 ABHD16AO95870 558 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 OR8G3PP0DMU2 310 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 EDNRAP25101 427 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 SERPINB10P48595 397 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 ROM1Q03395 351 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 SLC3A1Q07837 685 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 CDK5R1Q15078 307 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 OTPQ5XKR4 325 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 RPTNQ6XPR3 784 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 MINDY2Q8NBR6 621 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 ABHD3Q8WU67 409 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 TMEM45BQ96B21 275 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 ZNF775Q96BV0 537 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 ABHD6Q9BV23 337 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 PRRG4Q9BZD6 226 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 SEC61A2Q9H9S3 476 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 RNF122Q9H9V4 155 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 UPK3AO75631 287 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 GUCA1AP43080 201 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 LIPNQ5VXI9 398 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 LRRC69Q6ZNQ3 347 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 ZNF679Q8IYX0 411 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 MS4A15Q8N5U1 240 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 SMIM19Q96E16 107 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 AMELYQ99218 206 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 HDHD5Q9BXW7 423 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 SLCO1C1Q9NYB5 712 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 EMC3Q9P0I2 261 aa15.64■□□□□ 0.09
SHKBP1-224ENST00000600718 TRBV2A0A0J9YWF9 115 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 DHHO43323 396 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 RGS9O75916 674 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 PDGFAP04085 211 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 PSMB10P40306 273 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 OXA1LQ15070 435 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 PHYHD1Q5SRE7 291 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 C22orf42Q6IC83 251 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms