RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 COA3Q9Y2R0 106 aaPredicted RBP10.78□□□□□ -0.68
TGFB1-204ENST00000600196 RPL36Q9Y3U8 105 aaKnown RBP10.78□□□□□ -0.68
TGFB1-204ENST00000600196 LRRC42Q9Y546 428 aa10.78□□□□□ -0.68
TGFB1-204ENST00000600196 TMEM14AQ9Y6G1 99 aa10.78□□□□□ -0.68
TGFB1-204ENST00000600196 PHYHO14832 338 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 SLC2A10O95528 541 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 GAAP10253 952 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 COX5BP10606 129 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 ZNF823P16415 610 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 IGFBP2P18065 325 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 GSTT1P30711 240 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 UBE2NP61088 152 aaKnown RBP10.77□□□□□ -0.69
TGFB1-204ENST00000600196 FAM27E3Q08E93 113 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 SCRN3Q0VDG4 424 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 ECH1Q13011 328 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 AQP6Q13520 282 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 TBRG1Q3YBR2 411 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 KLHL22Q53GT1 634 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 KLHL24Q6TFL4 600 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 NCCRP1Q6ZVX7 275 aaPredicted RBP10.77□□□□□ -0.69
TGFB1-204ENST00000600196 C1orf174Q8IYL3 243 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 CYB561A3Q8NBI2 242 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 GJC3Q8NFK1 279 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 OR10H5Q8NGA6 315 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 ITFG2Q969R8 447 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 NABP1Q96AH0 204 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 ZNF582Q96NG8 517 aaPredicted RBP10.77□□□□□ -0.69
TGFB1-204ENST00000600196 YIPF3Q9GZM5 350 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 CRNNQ9UBG3 495 aaPredicted RBP10.77□□□□□ -0.69
TGFB1-204ENST00000600196 TIMM10BQ9Y5J6 103 aa10.77□□□□□ -0.69
TGFB1-204ENST00000600196 SPTBN1Q01082 2364 aaKnown RBP10.76□□□□□ -0.69
TGFB1-204ENST00000600196 DCTN6O00399 190 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 IGHV3-9P01782 118 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 CBR1P16152 277 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 NUDT6P53370 316 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 CDH11P55287 796 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 HIST1H3AP68431 136 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 IL5RAQ01344 420 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 FMODQ06828 376 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 SRSF1Q07955 248 aaKnown RBP eCLIP10.76□□□□□ -0.69
TGFB1-204ENST00000600196 RAB40BQ12829 278 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 HIST2H3PS2Q5TEC6 136 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 TMEM53Q6P2H8 277 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 DEGS2Q6QHC5 323 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 HIST2H3AQ71DI3 136 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 SLC16A14Q7RTX9 510 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 SLC16A9Q7RTY1 509 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 ALDH16A1Q8IZ83 802 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 FAM222BQ8WU58 562 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 NSMAFQ92636 917 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 ZNF837Q96EG3 531 aaPredicted RBP10.76□□□□□ -0.69
TGFB1-204ENST00000600196 CDADC1Q9BWV3 514 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 OR51V1Q9H2C8 321 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 SEC61A2Q9H9S3 476 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 INPP5EQ9NRR6 644 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 B3GNT2Q9NY97 397 aa10.76□□□□□ -0.69
TGFB1-204ENST00000600196 CNOT2Q9NZN8 540 aaKnown RBP10.76□□□□□ -0.69
TGFB1-204ENST00000600196 SMG1Q96Q15 3661 aaKnown RBP10.76□□□□□ -0.69
TGFB1-204ENST00000600196 IGKV1D-43A0A0B4J1Z2 117 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 TUBAL3A6NHL2 446 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 FAM90A27PA6NNH2 459 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 H7C1C5 153 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 MRPS14O60783 128 aaKnown RBP10.75□□□□□ -0.69
TGFB1-204ENST00000600196 LYZL6O75951 148 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 FADS2O95864 444 aaKnown RBP10.75□□□□□ -0.69
TGFB1-204ENST00000600196 IGKV3-15P01624 115 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 TFP02787 698 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 CCDC159P0C7I6 412 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 OR2T7P0C7T2 308 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 PIPP12273 146 aaPredicted RBP10.75□□□□□ -0.69
TGFB1-204ENST00000600196 TUBG1P23258 451 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 CAPZA2P47755 286 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 MTNR1AP48039 350 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 ENTPD1P49961 510 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 LCN6P62502 163 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 CDK5R2Q13319 367 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 MED21Q13503 144 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 APOFQ13790 326 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 ETFDHQ16134 617 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 SGCAQ16586 387 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 KLHL12Q53G59 568 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.75□□□□□ -0.69
TGFB1-204ENST00000600196 SKA3Q8IX90 412 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 TIGD4Q8IY51 512 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 WDR31Q8NA23 367 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 OR2AJ1Q8NGZ0 328 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 OR2T27Q8NH04 317 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 HAVCR2Q8TDQ0 301 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 ASB17Q8WXJ9 295 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 C11orf40Q8WZ69 217 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 MRPL48Q96GC5 212 aaKnown RBP10.75□□□□□ -0.69
TGFB1-204ENST00000600196 RADILQ96JH8 1075 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 TSSK2Q96PF2 358 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 DCLRE1CQ96SD1 692 aaKnown RBP10.75□□□□□ -0.69
TGFB1-204ENST00000600196 INTS14Q96SY0 518 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 JAM3Q9BX67 310 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 ACTR6Q9GZN1 396 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 TUBG2Q9NRH3 451 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 CYB5R1Q9UHQ9 305 aa10.75□□□□□ -0.69
TGFB1-204ENST00000600196 EXOGQ9Y2C4 368 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms