RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 TMEFF2Q9UIK5 374 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 ZNF346Q9UL40 294 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 UNC119BA6NIH7 251 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 CDC42EP2O14613 210 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 MGRN1O60291 552 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 OR10H3O60404 316 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 TRMUO75648 421 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 NDUFB2O95178 105 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 IGHMP01871 453 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 QDPRP09417 244 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 NR4A1P22736 598 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 MAGEA2P43356 314 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 OMPP47874 163 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 NPRL3Q12980 569 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 SNTB2Q13425 540 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 DAG1Q14118 895 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 HIST3H3Q16695 136 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 PGM2L1Q6PCE3 622 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 MEX3DQ86XN8 651 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 NOXO1Q8NFA2 376 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 RBP7Q96R05 134 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 SNX18Q96RF0 628 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 FUZQ9BT04 418 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 ALG12Q9BV10 488 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 MRPL13Q9BYD1 178 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 DENND2DQ9H6A0 471 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 B3GNT2Q9NY97 397 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 GRHPRQ9UBQ7 328 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 CMAHPQ9Y471 501 aa15.1■□□□□ 0.01
SHKBP1-203ENST00000594298 TNFRSF11BO00300 401 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 ACOT8O14734 319 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 PTP4A3O75365 173 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 FARS2O95363 451 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 CD14P08571 375 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 ADRA2AP08913 450 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 RAP2AP10114 183 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 LIMS1P48059 325 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 HMGA2P52926 109 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 DVL1P1P54792 670 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 TOP3AQ13472 1001 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 SEC23BQ15437 767 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 LRFN4Q6PJG9 635 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 DPPA2Q7Z7J5 298 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 WDFY1Q8IWB7 410 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 LRRC75AQ8NAA5 344 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 SYT14Q8NB59 555 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 MCHR2Q969V1 340 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 MRPL24Q96A35 216 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 RSRC1Q96IZ7 334 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 ZNF75AQ96N20 296 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 SMURF2Q9HAU4 748 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 FBXL3Q9UKT7 428 aa15.09■□□□□ 0.01
SHKBP1-203ENST00000594298 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.08■□□□□ 0
SHKBP1-203ENST00000594298 XKRYO14609 159 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 GSC2O15499 205 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 AHCYL1O43865 530 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 UBL3O95164 117 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 OR8G3PP0DMU2 310 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 ZNF35P13682 527 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 PCMT1P22061 227 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 SRP14P37108 136 aaKnown RBP15.08■□□□□ 0
SHKBP1-203ENST00000594298 GUCA1AP43080 201 aaPredicted RBP15.08■□□□□ 0
SHKBP1-203ENST00000594298 RUNX1T1Q06455 604 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 CD47Q08722 323 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 FHL1Q13642 323 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 FLOT2Q14254 428 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 GK3PQ14409 553 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 TRIP10Q15642 601 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 GSG1Q2KHT4 349 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 NRN1LQ496H8 165 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 THEM4Q5T1C6 240 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 KRT80Q6KB66 452 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 GNPDA2Q8TDQ7 276 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 MMADHCQ9H3L0 296 aaPredicted RBP15.08■□□□□ 0
SHKBP1-203ENST00000594298 YY1AP1Q9H869 796 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 REEP1Q9H902 201 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 SIGLEC7Q9Y286 467 aa15.08■□□□□ 0
SHKBP1-203ENST00000594298 SYNGR3O43761 229 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 SEC14L2O76054 403 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 HLA-HP01893 362 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 CD79AP11912 226 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 B4GALT1P15291 398 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 ZNF14P17017 642 aaPredicted RBP15.07■□□□□ 0
SHKBP1-203ENST00000594298 FPR3P25089 353 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 ZNF133P52736 654 aaPredicted RBP15.07■□□□□ 0
SHKBP1-203ENST00000594298 ERVK-25P63136 954 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 MSMPQ1L6U9 139 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 C10orf128Q5T292 105 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 GPR139Q6DWJ6 353 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 OR2T5Q6IEZ7 315 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 C1orf94Q6P1W5 598 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 SMARCD3Q6STE5 483 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 DPY19L2P2Q6ZN68 376 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 ZER1Q7Z7L7 766 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 IGFN1Q86VF2 1251 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 SLC22A24Q8N4F4 322 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 OR2T29Q8NH02 315 aa15.07■□□□□ 0
SHKBP1-203ENST00000594298 HDAC2Q92769 488 aaKnown RBP15.07■□□□□ 0
SHKBP1-203ENST00000594298 CADM1Q9BY67 442 aaKnown RBP15.07■□□□□ 0
SHKBP1-203ENST00000594298 MRPL37Q9BZE1 423 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms