RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 A0A1W2PRG6 482 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 KPNA4O00629 521 aaPredicted RBP14.69□□□□□ -0.06
RETREG3-210ENST00000590541 SERPINI2O75830 405 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 SERPINA5P05154 406 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 COX4I1P13073 169 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 ZNF250P15622 560 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 KLF3P57682 345 aaPredicted RBP14.69□□□□□ -0.06
RETREG3-210ENST00000590541 ERVS71-1P61550 626 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 ST3GAL3Q11203 375 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 BAMBIQ13145 260 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 LRRC23Q53EV4 343 aaPredicted RBP14.69□□□□□ -0.06
RETREG3-210ENST00000590541 HACD2Q6Y1H2 254 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 ZNF771Q7L3S4 317 aaPredicted RBP14.69□□□□□ -0.06
RETREG3-210ENST00000590541 PAQR4Q8N4S7 273 aaPredicted RBP14.69□□□□□ -0.06
RETREG3-210ENST00000590541 DEFB108BQ8NET1 73 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 SNX33Q8WV41 574 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 TMEM239Q8WW34 195 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 GTF3AQ92664 365 aaKnown RBP14.69□□□□□ -0.06
RETREG3-210ENST00000590541 POP5Q969H6 163 aaKnown RBP14.69□□□□□ -0.06
RETREG3-210ENST00000590541 GPR160Q9UJ42 338 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 NUP50Q9UKX7 468 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 MED31Q9Y3C7 131 aa14.69□□□□□ -0.06
RETREG3-210ENST00000590541 PPIAL4EA0A075B759 164 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 PPIAL4CA0A0B4J2A2 164 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 PPIAL4DF5H284 164 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 BLOC1S5-TXNDC5H3BN57 136 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 OR7A10O76100 309 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 IGHG1P01857 330 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 PPIAL4FP0DN26 164 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 FUT1P19526 365 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 MDKP21741 143 aaPredicted RBP14.68□□□□□ -0.06
RETREG3-210ENST00000590541 LSP1P33241 339 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 SELENOVP59797 346 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 PIN1Q13526 163 aaPredicted RBP14.68□□□□□ -0.06
RETREG3-210ENST00000590541 HFEQ30201 348 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 NRN1LQ496H8 165 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 KLF17Q5JT82 389 aaPredicted RBP14.68□□□□□ -0.06
RETREG3-210ENST00000590541 TREML1Q86YW5 311 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 SKA3Q8IX90 412 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 SLC15A3Q8IY34 581 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 POU5F2Q8N7G0 328 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 SYNPRQ8TBG9 265 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 RAB1CQ92928 201 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 SGTBQ96EQ0 304 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 TIMD4Q96H15 378 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 TPD52L3Q96J77 140 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 PRRC1Q96M27 445 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 GPA33Q99795 319 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 GAL3ST1Q99999 423 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 SLCO1C1Q9NYB5 712 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 PLEK2Q9NYT0 353 aa14.68□□□□□ -0.06
RETREG3-210ENST00000590541 SLC22A23A1A5C7 686 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 NPIPB13A6NJU9 1138 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 NPIPB4C9JG80 1138 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 FARS2O95363 451 aaKnown RBP14.67□□□□□ -0.06
RETREG3-210ENST00000590541 TSPAN19P0C672 248 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 PGA4P0DJD7 388 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 PGA3P0DJD8 388 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 OR8G3PP0DMU2 310 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 NR2C1P13056 603 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 CCL2P13500 99 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 GCH1P30793 250 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 OR1E2P47887 323 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 DAP3P51398 398 aaKnown RBP14.67□□□□□ -0.06
RETREG3-210ENST00000590541 TAF11Q15544 211 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 TSTQ16762 297 aaKnown RBP14.67□□□□□ -0.06
RETREG3-210ENST00000590541 ARMCX4Q5H9R4 360 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 LEG1Q6P5S2 330 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 NKAIN4Q8IVV8 208 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 TMEM255BQ8WV15 326 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 CMTM5Q96DZ9 223 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 OR51B6Q9H340 312 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 SAP30LQ9HAJ7 183 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 MMP26Q9NRE1 261 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 INIPQ9NRY2 104 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 DECR2Q9NUI1 292 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 CMTM6Q9NX76 183 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 ZNF281Q9Y2X9 895 aa14.67□□□□□ -0.06
RETREG3-210ENST00000590541 CLDN34H7C241 214 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 GSTA4O15217 222 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 DHHO43323 396 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 IFNW1P05000 195 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 TNFRSF1BP20333 461 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 MAKP20794 623 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 UGT2B15P54855 530 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 CLRN1P58418 232 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 LIPEQ05469 1076 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 RPL18Q07020 188 aaKnown RBP14.66□□□□□ -0.06
RETREG3-210ENST00000590541 SLC9A3R2Q15599 337 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 HIST3H3Q16695 136 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 ANKDD1AQ495B1 522 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 HIST2H2BDQ6DRA6 164 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 SLC30A7Q8NEW0 376 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 ZNF519Q8TB69 540 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 SLC25A28Q96A46 364 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 SEPHS2Q99611 448 aa14.66□□□□□ -0.06
RETREG3-210ENST00000590541 PURGQ9UJV8 347 aaKnown RBP14.66□□□□□ -0.06
RETREG3-210ENST00000590541 GMNCA6NCL1 334 aa14.65□□□□□ -0.06
RETREG3-210ENST00000590541 MCIDASD6RGH6 385 aa14.65□□□□□ -0.06
RETREG3-210ENST00000590541 CXCR6O00574 342 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms