RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ELK1P19419 428 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 CFPP27918 469 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 CASRP41180 1078 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 GUCA1AP43080 201 aaPredicted RBP9.29□□□□□ -0.92
VPS25-203ENST00000589520 CAPZA1P52907 286 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 H3F3AP84243 136 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 MELKQ14680 651 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 SF3A2Q15428 464 aaKnown RBP9.29□□□□□ -0.92
VPS25-203ENST00000589520 CSRP2Q16527 193 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 KCNMB1Q16558 191 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 PRAMEF20Q5VT98 475 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 TMEM244Q5VVB8 128 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 LYPD4Q6UWN0 246 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 STAC2Q6ZMT1 411 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.29□□□□□ -0.92
VPS25-203ENST00000589520 SAMD12Q8N8I0 201 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 ZNF671Q8TAW3 534 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 RAB40AQ8WXH6 277 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 RNF166Q96A37 237 aaPredicted RBP9.29□□□□□ -0.92
VPS25-203ENST00000589520 PNPLA2Q96AD5 504 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 ZC3HAV1LQ96H79 300 aaKnown RBP9.29□□□□□ -0.92
VPS25-203ENST00000589520 FER1L6-AS2Q96M78 137 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 ABHD6Q9BV23 337 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 C14orf119Q9NWQ9 140 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 TBC1D24Q9ULP9 559 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 FOXJ3Q9UPW0 622 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 CAMK2AQ9UQM7 478 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 KLHDC2Q9Y2U9 406 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 R4GMQ9 66 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 ZFYVE26Q68DK2 2539 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 A0A1W2PQ09 198 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 PRR32B1ATL7 298 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 PIN1P1O15428 100 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 RAD1O60671 282 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 PGA4P0DJD7 388 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 PGA3P0DJD8 388 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 IL11P20809 199 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 CNR1P21554 472 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 DLSTP36957 453 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 MMP16P51512 607 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 AGFG1P52594 562 aaKnown RBP9.28□□□□□ -0.92
VPS25-203ENST00000589520 MRPS10P82664 201 aaKnown RBP9.28□□□□□ -0.92
VPS25-203ENST00000589520 UBE2NLQ5JXB2 153 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 PDSS1Q5T2R2 415 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 FAM27D1Q5T7N8 215 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 RAET1LQ5VY80 246 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 SLC25A47Q6Q0C1 308 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 KLHL24Q6TFL4 600 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 NR2C2APQ86WQ0 139 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 CATSPERDQ86XM0 798 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 KDM8Q8N371 416 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 NOXO1Q8NFA2 376 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 OR13C5Q8NGS8 318 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 OR2AJ1Q8NGZ0 328 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 RNF133Q8WVZ7 376 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 HTRA1Q92743 480 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 MCHR2Q969V1 340 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 TXNDC15Q96J42 360 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 NPAS1Q99742 590 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 PRRX2Q99811 253 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 C7orf50Q9BRJ6 194 aaKnown RBP9.28□□□□□ -0.92
VPS25-203ENST00000589520 TTTY10Q9BZA0 68 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 C1orf198Q9H425 327 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 MOB1AQ9H8S9 216 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 POLE4Q9NR33 117 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 RHBDL2Q9NX52 303 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 STMN3Q9NZ72 180 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 CKLFQ9UBR5 152 aa9.28□□□□□ -0.92
VPS25-203ENST00000589520 AK6Q9Y3D8 172 aaKnown RBP9.28□□□□□ -0.92
VPS25-203ENST00000589520 FLNBO75369 2602 aaKnown RBP9.28□□□□□ -0.92
VPS25-203ENST00000589520 EP300Q09472 2414 aaPredicted RBP9.27□□□□□ -0.92
VPS25-203ENST00000589520 EXPH5Q8NEV8 1989 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 OR2M5A3KFT3 312 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 SMIM30A4D0T7 59 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 PROB1E7EW31 1015 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 STMND1H3BQB6 276 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 PSMD9O00233 223 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 DVL2O14641 736 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 TERTO14746 1132 aaKnown RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 TRAF3IP2O43734 574 aaPredicted RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 TRAPPC2P0DI81 140 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 TRAPPC2BP0DI82 140 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 ATF1P18846 271 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 ACHEP22303 614 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 MNDAP41218 407 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 ZNF133P52736 654 aaPredicted RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 OR10A3P58181 314 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 RAC3P60763 192 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 LSM6P62312 80 aaKnown RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 DBPQ10586 325 aaPredicted RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 AIMP2Q13155 320 aaKnown RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 TRIP6Q15654 476 aaKnown RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 INPP5JQ15735 1006 aaPredicted RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 ETFDHQ16134 617 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 HIST3H3Q16695 136 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 SLC25A35Q3KQZ1 300 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 CCDC157Q569K6 752 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 WDR38Q5JTN6 314 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 ABHD17BQ5VST6 288 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 ESPNLQ6ZVH7 1005 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms