RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 CTLA4P16410 223 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 FPR3P25089 353 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 CDKN2AP42771 156 aaKnown RBP9.56□□□□□ -0.88
DDB1-222ENST00000543627 FXYD6P3P58550 94 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 MRPS34P82930 218 aaKnown RBP9.56□□□□□ -0.88
DDB1-222ENST00000543627 TSPAN31Q12999 210 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 ADIPOQQ15848 244 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 MICAQ29983 383 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 PTCHD4Q6ZW05 846 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 Q71RC1 249 aaPredicted RBP9.56□□□□□ -0.88
DDB1-222ENST00000543627 FAM122BQ7Z309 247 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 DTX2Q86UW9 622 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 ZNF584Q8IVC4 421 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 AQP12AQ8IXF9 295 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 LINC00471Q8N535 108 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 MAPK1IP1LQ8NDC0 245 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 SDR9C7Q8NEX9 313 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 OR10G2Q8NGC3 310 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 OR52L1Q8NGH7 329 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 OR52E2Q8NGJ4 325 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 OR1J2Q8NGS2 313 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 OTULINQ96BN8 352 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 TSSK2Q96PF2 358 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 NMNAT3Q96T66 252 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 SYT3Q9BQG1 590 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 NUAK2Q9H093 628 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 FN3KQ9H479 309 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 GSX1Q9H4S2 264 aaPredicted RBP9.56□□□□□ -0.88
DDB1-222ENST00000543627 SMURF2Q9HAU4 748 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 DYNLRB1Q9NP97 96 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 TBC1D23Q9NUY8 699 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 ZNF701Q9NV72 531 aaPredicted RBP9.56□□□□□ -0.88
DDB1-222ENST00000543627 FBXL3Q9UKT7 428 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 POLR1DQ9Y2S0 133 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 CMAHPQ9Y471 501 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 UGT2A1Q9Y4X1 527 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 C5orf49A4QMS7 147 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 B9A039 149 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 TMCC2O75069 709 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 SCG5P05408 212 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 HIST1H1CP16403 213 aaKnown RBP9.55□□□□□ -0.88
DDB1-222ENST00000543627 MSR1P21757 451 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 NR4A1P22736 598 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 STOMP27105 288 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 POU1F1P28069 291 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 MAGEA2P43356 314 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 GSSP48637 474 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 GDI2P50395 445 aaKnown RBP9.55□□□□□ -0.88
DDB1-222ENST00000543627 HMGA2P52926 109 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 CBX1P83916 185 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 PSG4Q00888 419 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 C1orf146Q5VVC0 180 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 PGM2L1Q6PCE3 622 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 DPPA2Q7Z7J5 298 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 KRTAP1-3Q8IUG1 177 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 ALDH16A1Q8IZ83 802 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 ZCCHC24Q8N2G6 241 aaKnown RBP9.55□□□□□ -0.88
DDB1-222ENST00000543627 CIARTQ8N365 385 aaPredicted RBP9.55□□□□□ -0.88
DDB1-222ENST00000543627 PAQR4Q8N4S7 273 aaPredicted RBP9.55□□□□□ -0.88
DDB1-222ENST00000543627 CPEB3Q8NE35 698 aaKnown RBP9.55□□□□□ -0.88
DDB1-222ENST00000543627 NUP37Q8NFH4 326 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 OR4C15Q8NGM1 316 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 GIPC3Q8TF64 312 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 IGFBPL1Q8WX77 278 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 POP5Q969H6 163 aaKnown RBP9.55□□□□□ -0.88
DDB1-222ENST00000543627 NABP1Q96AH0 204 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 NMD3Q96D46 503 aaKnown RBP9.55□□□□□ -0.88
DDB1-222ENST00000543627 ZNF75AQ96N20 296 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 SMR3AQ99954 134 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 BDH2Q9BUT1 245 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 TMUB1Q9BVT8 246 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 ZNF416Q9BWM5 594 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 TSSK6Q9BXA6 273 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 YY1AP1Q9H869 796 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 RPRD1BQ9NQG5 326 aaKnown RBP9.55□□□□□ -0.88
DDB1-222ENST00000543627 POLE4Q9NR33 117 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 PDP1Q9P0J1 537 aaPredicted RBP9.55□□□□□ -0.88
DDB1-222ENST00000543627 EIF3KQ9UBQ5 218 aaKnown RBP9.55□□□□□ -0.88
DDB1-222ENST00000543627 SLC7A8Q9UHI5 535 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 TIMM10BQ9Y5J6 103 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 ITPR3Q14573 2671 aa9.55□□□□□ -0.88
DDB1-222ENST00000543627 VPS13CQ709C8 3753 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 A0A1W2PPW3 197 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 C12orf71A8MTZ7 269 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 RNF223E7ERA6 249 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 H3BN98 237 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 FKBP6O75344 327 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 TIPRLO75663 272 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 CIB2O75838 187 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 ADRA2AP08913 450 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 CST2P09228 141 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 MMP7P09237 267 aaPredicted RBP9.54□□□□□ -0.88
DDB1-222ENST00000543627 ZNF35P13682 527 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 PRKACGP22612 351 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 ZNF133P52736 654 aaPredicted RBP9.54□□□□□ -0.88
DDB1-222ENST00000543627 PCBD1P61457 104 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 ERVS71-1P61550 626 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.54□□□□□ -0.88
DDB1-222ENST00000543627 TNK1Q13470 666 aa9.54□□□□□ -0.88
DDB1-222ENST00000543627 MEP1BQ16820 701 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms