RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 ANGPTL3Q9Y5C1 460 aa3.13□□□□□ -1.91
YBX3-205ENST00000536107 SEC14L6B5MCN3 397 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 NPFFO15130 113 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 TM9SF1O15321 606 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 TAPBPO15533 448 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 DNPH1O43598 174 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 DOK2O60496 412 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 PLOD3O60568 738 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 PMS2P2O95744 297 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 AHSGP02765 367 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 CTAGE8P0CG41 777 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 INAFM2P0DMQ5 153 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 ZNF250P15622 560 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 CPEP16870 476 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 IVDP26440 423 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 STIP1P31948 543 aaKnown RBP3.12□□□□□ -1.91
YBX3-205ENST00000536107 BMXP51813 675 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 SUMO3P55854 103 aaPredicted RBP3.12□□□□□ -1.91
YBX3-205ENST00000536107 ERVS71-1P61550 626 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 RAB1AP62820 205 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 SLC35A1P78382 337 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 BASP1P80723 227 aaKnown RBP3.12□□□□□ -1.91
YBX3-205ENST00000536107 PRB3Q04118 309 aaPredicted RBP3.12□□□□□ -1.91
YBX3-205ENST00000536107 MFGE8Q08431 387 aaPredicted RBP3.12□□□□□ -1.91
YBX3-205ENST00000536107 CBFBQ13951 182 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 SLC17A1Q14916 467 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 TSNQ15631 228 aaKnown RBP3.12□□□□□ -1.91
YBX3-205ENST00000536107 NDUFAF6Q330K2 333 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 VPS26BQ4G0F5 336 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 ATP6AP1LQ52LC2 224 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 WDR25Q64LD2 544 aaPredicted RBP3.12□□□□□ -1.91
YBX3-205ENST00000536107 TMEM225Q6GV28 225 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 GRHL2Q6ISB3 625 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 LRIG3Q6UXM1 1119 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 RBM43Q6ZSC3 357 aaKnown RBP3.12□□□□□ -1.91
YBX3-205ENST00000536107 LINGO2Q7L985 606 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 SZRD1Q7Z422 152 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 ADAMTSL2Q86TH1 951 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 PRUNE1Q86TP1 453 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 VRK2Q86Y07 508 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 FAM90A1Q86YD7 464 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 CTAGE4Q8IX94 777 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 GPR137CQ8N3F9 429 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 C11orf42Q8N5U0 333 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 OR5W2Q8NH69 310 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 RORBQ92753 470 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 EXT2Q93063 718 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 CHMP6Q96FZ7 201 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 MED30Q96HR3 178 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 MAGEB18Q96M61 343 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 ZNF681Q96N22 645 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 SERPINI1Q99574 410 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 ARHGDIGQ99819 225 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 LMF2Q9BU23 707 aaKnown RBP3.12□□□□□ -1.91
YBX3-205ENST00000536107 SLC19A3Q9BZV2 496 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 OR11A1Q9GZK7 315 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 CYSLTR2Q9NS75 346 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 TMEM181Q9P2C4 612 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 ONECUT1Q9UBC0 465 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 TBK1Q9UHD2 729 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 PPP1R3CQ9UQK1 317 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 HDGFL3Q9Y3E1 203 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 VPS13DQ5THJ4 4388 aa3.12□□□□□ -1.91
YBX3-205ENST00000536107 SRRM2Q9UQ35 2752 aaKnown RBP3.12□□□□□ -1.91
YBX3-205ENST00000536107 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 IGLV3-9A0A075B6K5 115 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 A0A1W2PQD3 144 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 MAGEB16A2A368 324 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 ZSCAN5BA6NJL1 495 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 AP4M1O00189 453 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 PHYHO14832 338 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 CHST1O43916 411 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 IGHV3-13P01766 116 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 CCL2P13500 99 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 MMP9P14780 707 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 EPORP19235 508 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 ATP6V1C1P21283 382 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 PAICSP22234 425 aaKnown RBP3.11□□□□□ -1.91
YBX3-205ENST00000536107 CNTFRP26992 372 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 TACR3P29371 465 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 MYCNOSP40205 109 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 NCBP2P52298 156 aaKnown RBP eCLIP3.11□□□□□ -1.91
YBX3-205ENST00000536107 ZBED6P86452 979 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 PMS2P3Q13401 168 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 ODF1Q14990 250 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 TGFBIQ15582 683 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 LRRC75BQ2VPJ9 315 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 CEACAM16Q2WEN9 425 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 TMEM95Q3KNT9 176 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 SPRNQ5BIV9 151 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 SGO1Q5FBB7 561 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 SPATA46Q5T0L3 261 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 FAM27D1Q5T7N8 215 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 TTC19Q6DKK2 380 aaPredicted RBP3.11□□□□□ -1.91
YBX3-205ENST00000536107 SULT1C3Q6IMI6 304 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 AADACL2Q6P093 401 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 RNF165Q6ZSG1 346 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 VMO1Q7Z5L0 202 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 MTERF4Q7Z6M4 381 aaKnown RBP3.11□□□□□ -1.91
YBX3-205ENST00000536107 PNKDQ8N490 385 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms