RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 DCTN6O00399 190 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 CST2P09228 141 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 ZNF35P13682 527 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 TTKP33981 857 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 GUCA1AP43080 201 aaPredicted RBP19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 FABP6P51161 128 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 ENDOGQ14249 297 aaKnown RBP19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 LNX2Q8N448 690 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 SDR9C7Q8NEX9 313 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 OR52E2Q8NGJ4 325 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 NRBF2Q96F24 287 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 FOXN4Q96NZ1 517 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 DDOQ99489 341 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 KCNN2Q9H2S1 579 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 COA3Q9Y2R0 106 aaPredicted RBP19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 DSCAMO60469 2012 aa19.68■□□□□ 0.74
SFSWAP-204ENST00000535399 PRRC2AP48634 2157 aaKnown RBP19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 IGLV1-36A0A0B4J1U3 117 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 SMPD2O60906 423 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 RENP00797 406 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 ZNF32P17041 273 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 CRABP1P29762 137 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 ACTR3P61158 418 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 KPNB1Q14974 876 aaKnown RBP19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 ZNF362Q5T0B9 420 aaPredicted RBP19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 UGT2A3Q6UWM9 527 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 GLB1L2Q8IW92 636 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 OR6V1Q8N148 313 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 NUP37Q8NFH4 326 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 ZNF416Q9BWM5 594 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 GRIP2Q9C0E4 1043 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 RERGLQ9H628 205 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 EMC7Q9NPA0 242 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 CCNB1IP1Q9NPC3 277 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 CA10Q9NS85 328 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 ZNF701Q9NV72 531 aaPredicted RBP19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 FAIMQ9NVQ4 179 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 B9D1Q9UPM9 204 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 BAIAP2Q9UQB8 552 aa19.67■□□□□ 0.74
SFSWAP-204ENST00000535399 HEATR1Q9H583 2144 aaKnown RBP19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 USF3Q68DE3 2245 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 OR6C68A6NDL8 312 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 MPZL1O95297 269 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 ANXA8P13928 327 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 PAX1P15863 534 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 FASP25445 335 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 NKX6-1P78426 367 aaPredicted RBP19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 PSG4Q00888 419 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 DBPQ10586 325 aaPredicted RBP19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 SLC36A3Q495N2 470 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 PABPC1L2AQ5JQF8 200 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 AGAP6Q5VW22 663 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 C11orf71Q6IPW1 123 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 FBXL14Q8N1E6 418 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 LRRC75A-AS1Q8N1F1 130 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 MUC15Q8N387 334 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 OR2T33Q8NG76 320 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 OR5K1Q8NHB7 308 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 GSX2Q9BZM3 304 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 CXorf56Q9H5V9 222 aa19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 SRA1Q9HD15 236 aaKnown RBP19.66■□□□□ 0.74
SFSWAP-204ENST00000535399 FCGR1AP12314 374 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 NR4A1P22736 598 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 APOBEC3AP31941 199 aaPredicted RBP19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 ARHGDIAP52565 204 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 HSF2Q03933 536 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 OTPQ5XKR4 325 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 DNM1P34Q6PK57 102 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 YTHDF3Q7Z739 585 aaKnown RBP19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 AMIGO2Q86SJ2 522 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 SYT9Q86SS6 491 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 ZBTB46Q86UZ6 589 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 ATG16L2Q8NAA4 619 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 CPEB3Q8NE35 698 aaKnown RBP19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 SLC30A7Q8NEW0 376 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 LRTOMTQ8WZ04 291 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 RACGAP1Q9H0H5 632 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 WNT5BQ9H1J7 359 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 FN3KQ9H479 309 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 ZNF556Q9HAH1 456 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 RPRD1BQ9NQG5 326 aaKnown RBP19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 CBLN4Q9NTU7 201 aa19.65■□□□□ 0.74
SFSWAP-204ENST00000535399 C12orf71A8MTZ7 269 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 GPANK1O95872 356 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 GAAP10253 952 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 OSMP13725 252 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 PTH2RP49190 550 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 PCBD1P61457 104 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 PLP2Q04941 152 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 KCNMB1Q16558 191 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 KRT80Q6KB66 452 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 FAHD1Q6P587 224 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 SPNS3Q6ZMD2 512 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 KRTAP1-3Q8IUG1 177 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 PAQR4Q8N4S7 273 aaPredicted RBP19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 CYB561A3Q8NBI2 242 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 SLC37A3Q8NCC5 494 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 AKR7LQ8NHP1 331 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 TEX47Q8TBZ9 253 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms