RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 Q96MF0 132 aa18.43■□□□□ 0.54
PKP3-211ENST00000534401 DOK1Q99704 481 aa18.43■□□□□ 0.54
PKP3-211ENST00000534401 BARX1Q9HBU1 254 aaPredicted RBP18.43■□□□□ 0.54
PKP3-211ENST00000534401 POLE4Q9NR33 117 aa18.43■□□□□ 0.54
PKP3-211ENST00000534401 SLC7A8Q9UHI5 535 aa18.43■□□□□ 0.54
PKP3-211ENST00000534401 GDF2Q9UK05 429 aaPredicted RBP18.43■□□□□ 0.54
PKP3-211ENST00000534401 CSPG4Q6UVK1 2322 aa18.43■□□□□ 0.54
PKP3-211ENST00000534401 CCNB2O95067 398 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 PTHP01270 115 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 ZNF32P17041 273 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 MSR1P21757 451 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 LAP3P28838 519 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 EVX1P49640 407 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 FLOT2Q14254 428 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 KCNMB1Q16558 191 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 RASSF6Q6ZTQ3 369 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 CPEB3Q8NE35 698 aaKnown RBP18.42■□□□□ 0.54
PKP3-211ENST00000534401 COX4I2Q96KJ9 171 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 DDOQ99489 341 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 BDH2Q9BUT1 245 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 REEP1Q9H902 201 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 FBXO9Q9UK97 447 aaPredicted RBP18.42■□□□□ 0.54
PKP3-211ENST00000534401 SAMHD1Q9Y3Z3 626 aaKnown RBP18.42■□□□□ 0.54
PKP3-211ENST00000534401 CDH10Q9Y6N8 788 aa18.42■□□□□ 0.54
PKP3-211ENST00000534401 ARRDC5A6NEK1 342 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 SOCS2O14508 198 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 PPP1R3DO95685 299 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 TP53P04637 393 aaPredicted RBP18.41■□□□□ 0.54
PKP3-211ENST00000534401 IGFBP1P08833 259 aaPredicted RBP18.41■□□□□ 0.54
PKP3-211ENST00000534401 BMP4P12644 408 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 PCSK6P29122 969 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 RASSF2P50749 326 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 PSG4Q00888 419 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 PPP1R8Q12972 351 aaKnown RBP18.41■□□□□ 0.54
PKP3-211ENST00000534401 SNTB2Q13425 540 aaKnown RBP18.41■□□□□ 0.54
PKP3-211ENST00000534401 PABPC1L2AQ5JQF8 200 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 RPL13AP3Q6NVV1 102 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 PAQR4Q8N4S7 273 aaPredicted RBP18.41■□□□□ 0.54
PKP3-211ENST00000534401 SLC30A7Q8NEW0 376 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 C18orf12Q96KH6 178 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 ERMAPQ96PL5 475 aaPredicted RBP18.41■□□□□ 0.54
PKP3-211ENST00000534401 WNT5BQ9H1J7 359 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 SYT4Q9H2B2 425 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 KCNN2Q9H2S1 579 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 MMADHCQ9H3L0 296 aaPredicted RBP18.41■□□□□ 0.54
PKP3-211ENST00000534401 RNF121Q9H920 327 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 SPEF1Q9Y4P9 236 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 PMF1-BGLAPU3KQ54 211 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 TLN2Q9Y4G6 2542 aa18.41■□□□□ 0.54
PKP3-211ENST00000534401 SETD2Q9BYW2 2564 aaPredicted RBP18.4■□□□□ 0.54
PKP3-211ENST00000534401 C2CD3Q4AC94 2353 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 VSTM5A8MXK1 200 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 BHLHE40O14503 412 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 ICMTO60725 284 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 KHDRBS3O75525 346 aaKnown RBP18.4■□□□□ 0.54
PKP3-211ENST00000534401 RIPPLY3P57055 190 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 PLP2Q04941 152 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 ZNF362Q5T0B9 420 aaPredicted RBP18.4■□□□□ 0.54
PKP3-211ENST00000534401 OR1J2Q8NGS2 313 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 SLCO4A1Q96BD0 722 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 POM121L2Q96KW2 1035 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 ZNF416Q9BWM5 594 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 OR2H1Q9GZK4 316 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 NUAK2Q9H093 628 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 TIMM10BQ9Y5J6 103 aa18.4■□□□□ 0.54
PKP3-211ENST00000534401 IGLV1-36A0A0B4J1U3 117 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 IQCMA0A1B0GVH7 501 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 DCTN6O00399 190 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 GPRIN2O60269 458 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 CST1P01037 141 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 HIST1H1CP16403 213 aaKnown RBP18.39■□□□□ 0.53
PKP3-211ENST00000534401 GUCA1AP43080 201 aaPredicted RBP18.39■□□□□ 0.53
PKP3-211ENST00000534401 PPOXP50336 477 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 PCBD1P61457 104 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 LSM6P62312 80 aaKnown RBP18.39■□□□□ 0.53
PKP3-211ENST00000534401 CLEC12BQ2HXU8 276 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 KRT80Q6KB66 452 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 UGT2A3Q6UWM9 527 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 ZBTB46Q86UZ6 589 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 CIARTQ8N365 385 aaPredicted RBP18.39■□□□□ 0.53
PKP3-211ENST00000534401 AQP11Q8NBQ7 271 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 NPEPL1Q8NDH3 523 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 OR10H5Q8NGA6 315 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 OR8D4Q8NGM9 314 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 MRPL24Q96A35 216 aaKnown RBP18.39■□□□□ 0.53
PKP3-211ENST00000534401 IFT27Q9BW83 186 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 PLA2G12AQ9BZM1 189 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 LRMDAQ9H2I8 198 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 EGLN3Q9H6Z9 239 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 CCNB1IP1Q9NPC3 277 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 CMAHPQ9Y471 501 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 U3KQV3 271 aa18.39■□□□□ 0.53
PKP3-211ENST00000534401 LOC100509620A0A075B734 347 aa18.38■□□□□ 0.53
PKP3-211ENST00000534401 A0A1W2PPL8 197 aa18.38■□□□□ 0.53
PKP3-211ENST00000534401 TRIM64A6NGJ6 449 aa18.38■□□□□ 0.53
PKP3-211ENST00000534401 TRIM64BA6NI03 449 aa18.38■□□□□ 0.53
PKP3-211ENST00000534401 C12orf71A8MTZ7 269 aa18.38■□□□□ 0.53
PKP3-211ENST00000534401 SLC16A7O60669 478 aa18.38■□□□□ 0.53
PKP3-211ENST00000534401 GSTM3P21266 225 aa18.38■□□□□ 0.53
PKP3-211ENST00000534401 APEX1P27695 318 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms