RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 C8orf59Q8N0T1 100 aaPredicted RBP12.01□□□□□ -0.49
CD44-224ENST00000526669 SLC22A24Q8N4F4 322 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 STEAP2Q8NFT2 490 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 OR10H5Q8NGA6 315 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 FGFBP3Q8TAT2 258 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 LINC01560Q8TB33 94 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 CNIH3Q8TBE1 160 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 TFAP2CQ92754 450 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 ZNF582Q96NG8 517 aaPredicted RBP12.01□□□□□ -0.49
CD44-224ENST00000526669 RASSF4Q9H2L5 321 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 SLC17A5Q9NRA2 495 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 MRPL22Q9NWU5 206 aaKnown RBP12.01□□□□□ -0.49
CD44-224ENST00000526669 H2AFY2Q9P0M6 372 aaPredicted RBP12.01□□□□□ -0.49
CD44-224ENST00000526669 POLR1DQ9Y2S0 133 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 ADGRG4Q8IZF6 3080 aa12.01□□□□□ -0.49
CD44-224ENST00000526669 PTPN13Q12923 2485 aa12□□□□□ -0.49
CD44-224ENST00000526669 SELENOFO60613 162 aa12□□□□□ -0.49
CD44-224ENST00000526669 APOL3O95236 402 aa12□□□□□ -0.49
CD44-224ENST00000526669 CLDN1O95832 211 aa12□□□□□ -0.49
CD44-224ENST00000526669 HLA-HP01893 362 aa12□□□□□ -0.49
CD44-224ENST00000526669 TFP02787 698 aa12□□□□□ -0.49
CD44-224ENST00000526669 PSKH1P11801 424 aa12□□□□□ -0.49
CD44-224ENST00000526669 CD79AP11912 226 aa12□□□□□ -0.49
CD44-224ENST00000526669 GABRB1P18505 474 aa12□□□□□ -0.49
CD44-224ENST00000526669 MSR1P21757 451 aa12□□□□□ -0.49
CD44-224ENST00000526669 GSTT1P30711 240 aa12□□□□□ -0.49
CD44-224ENST00000526669 HOXC12P31275 282 aa12□□□□□ -0.49
CD44-224ENST00000526669 FMO3P31513 532 aa12□□□□□ -0.49
CD44-224ENST00000526669 NAA10P41227 235 aaPredicted RBP12□□□□□ -0.49
CD44-224ENST00000526669 GUCA1AP43080 201 aaPredicted RBP12□□□□□ -0.49
CD44-224ENST00000526669 HSPA13P48723 471 aa12□□□□□ -0.49
CD44-224ENST00000526669 CDH11P55287 796 aa12□□□□□ -0.49
CD44-224ENST00000526669 UBE2NP61088 152 aaKnown RBP12□□□□□ -0.49
CD44-224ENST00000526669 SNRPGP62308 76 aaKnown RBP12□□□□□ -0.49
CD44-224ENST00000526669 MRPS34P82930 218 aaKnown RBP12□□□□□ -0.49
CD44-224ENST00000526669 TEKQ02763 1124 aa12□□□□□ -0.49
CD44-224ENST00000526669 PIGFQ07326 219 aa12□□□□□ -0.49
CD44-224ENST00000526669 AADACL4Q5VUY2 407 aa12□□□□□ -0.49
CD44-224ENST00000526669 NXNL2Q5VZ03 156 aa12□□□□□ -0.49
CD44-224ENST00000526669 OR7E24Q6IFN5 339 aa12□□□□□ -0.49
CD44-224ENST00000526669 USP51Q70EK9 711 aa12□□□□□ -0.49
CD44-224ENST00000526669 SLC16A14Q7RTX9 510 aa12□□□□□ -0.49
CD44-224ENST00000526669 ERI1Q8IV48 349 aaKnown RBP12□□□□□ -0.49
CD44-224ENST00000526669 LINC00346Q8IVM7 164 aa12□□□□□ -0.49
CD44-224ENST00000526669 WDR31Q8NA23 367 aa12□□□□□ -0.49
CD44-224ENST00000526669 SETD9Q8NE22 299 aa12□□□□□ -0.49
CD44-224ENST00000526669 C1orf162Q8NEQ5 155 aaPredicted RBP12□□□□□ -0.49
CD44-224ENST00000526669 SLC26A10Q8NG04 563 aa12□□□□□ -0.49
CD44-224ENST00000526669 APH1BQ8WW43 257 aa12□□□□□ -0.49
CD44-224ENST00000526669 ZNF184Q99676 751 aaPredicted RBP12□□□□□ -0.49
CD44-224ENST00000526669 ZNF416Q9BWM5 594 aa12□□□□□ -0.49
CD44-224ENST00000526669 C1QTNF6Q9BXI9 259 aa12□□□□□ -0.49
CD44-224ENST00000526669 NOX3Q9HBY0 568 aa12□□□□□ -0.49
CD44-224ENST00000526669 ZNF224Q9NZL3 707 aa12□□□□□ -0.49
CD44-224ENST00000526669 COMMD3-BMI1R4GMX3 469 aa12□□□□□ -0.49
CD44-224ENST00000526669 COL12A1Q99715 3063 aa12□□□□□ -0.49
CD44-224ENST00000526669 OR5H1A6NKK0 313 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 PRODHO43272 600 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 FARS2O95363 451 aaKnown RBP11.99□□□□□ -0.49
CD44-224ENST00000526669 OR8G3PP0DMU2 310 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 NPR2P20594 1047 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 HSF2Q03933 536 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 GLO1Q04760 184 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 ENDOGQ14249 297 aaKnown RBP11.99□□□□□ -0.49
CD44-224ENST00000526669 TAB1Q15750 504 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 SMN1Q16637 294 aaKnown RBP11.99□□□□□ -0.49
CD44-224ENST00000526669 LCN1P1Q5VSP4 162 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 CORO6Q6QEF8 472 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 MEPCEQ7L2J0 689 aaKnown RBP11.99□□□□□ -0.49
CD44-224ENST00000526669 SHFQ7M4L6 423 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 MDP1Q86V88 176 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 WFDC8Q8IUA0 241 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 GID4Q8IVV7 300 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 OR6N2Q8NGY6 317 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 RHOXF1Q8NHV9 184 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 SMAP2Q8WU79 429 aaPredicted RBP11.99□□□□□ -0.49
CD44-224ENST00000526669 TRUB1Q8WWH5 349 aaKnown RBP11.99□□□□□ -0.49
CD44-224ENST00000526669 CNBD2Q96M20 576 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 WFIKKN1Q96NZ8 548 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 MED18Q9BUE0 208 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 HDHD5Q9BXW7 423 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 RNF121Q9H920 327 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 WDR76Q9H967 626 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 SIAEQ9HAT2 523 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 CLN6Q9NWW5 311 aa11.99□□□□□ -0.49
CD44-224ENST00000526669 WBP4O75554 376 aaKnown RBP11.98□□□□□ -0.49
CD44-224ENST00000526669 THBDP07204 575 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 SPARCP09486 303 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 ZNF823P16415 610 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 ZNF32P17041 273 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 ISL1P61371 349 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 ADAM8P78325 824 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 IL18R1Q13478 541 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 PPA1Q15181 289 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 OCLNQ16625 522 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 SLC35D3Q5M8T2 416 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 TIMM23BQ5SRD1 257 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 MEX3BQ6ZN04 569 aaKnown RBP11.98□□□□□ -0.49
CD44-224ENST00000526669 ZNF627Q7L945 461 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 THAP5Q7Z6K1 395 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms