RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 M6PRP20645 277 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 AVPR2P30518 371 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 SDHAP31040 664 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 MFGE8Q08431 387 aaPredicted RBP12.16□□□□□ -0.46
GPC1-209ENST00000495100 NR0B2Q15466 257 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 TRAM1Q15629 374 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 ZBTB37Q5TC79 503 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 AWAT2Q6E213 333 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 ZNF704Q6ZNC4 412 aaPredicted RBP12.16□□□□□ -0.46
GPC1-209ENST00000495100 BTN2A1Q7KYR7 527 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 ZNF584Q8IVC4 421 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 TCTE3Q8IZS6 198 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 BPIFB2Q8N4F0 458 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 OR14A16Q8NHC5 309 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 DAZLQ92904 295 aaKnown RBP12.16□□□□□ -0.46
GPC1-209ENST00000495100 WNT2BQ93097 391 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 MMP17Q9ULZ9 603 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 BAIAP2Q9UQB8 552 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 A0A087WV62 115 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 TRBV11-1A0A0K0K1C0 115 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 LOC101059948A0A1B0GTJ6 334 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 TEX51A0A1B0GUA7 166 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 PMP2P02689 132 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 ZCCHC12Q6PEW1 402 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 KCTD20Q7Z5Y7 419 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 RGP1Q92546 391 aaPredicted RBP12.15□□□□□ -0.46
GPC1-209ENST00000495100 TM4SF19Q96DZ7 209 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 CFHR5Q9BXR6 569 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 ZNF576Q9H609 170 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 CXorf51AA0A1B0GTR3 108 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 OR2AT4A6NND4 320 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 TRIM3O75382 744 aaPredicted RBP12.15□□□□□ -0.46
GPC1-209ENST00000495100 MAPK3P27361 379 aaPredicted RBP12.15□□□□□ -0.46
GPC1-209ENST00000495100 C2orf68Q2NKX9 166 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 FHL5Q5TD97 284 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 METTL11BQ5VVY1 283 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 DCAF12L2Q5VW00 463 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 PWWP2BQ6NUJ5 590 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 KCTD18Q6PI47 426 aaPredicted RBP12.15□□□□□ -0.46
GPC1-209ENST00000495100 SPERTQ8NA61 448 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 SLC25A38Q96DW6 304 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 TCTN2Q96GX1 697 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 OR6C1Q96RD1 312 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 POFUT1Q9H488 388 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 TAS2R3Q9NYW6 316 aa12.15□□□□□ -0.46
GPC1-209ENST00000495100 SYT7O43581 403 aa12.15□□□□□ -0.47
GPC1-209ENST00000495100 RP2O75695 350 aa12.15□□□□□ -0.47
GPC1-209ENST00000495100 TSPAN9O75954 239 aa12.15□□□□□ -0.47
GPC1-209ENST00000495100 NFYAP23511 347 aaPredicted RBP12.15□□□□□ -0.47
GPC1-209ENST00000495100 GLO1Q04760 184 aa12.15□□□□□ -0.47
GPC1-209ENST00000495100 TMEM176BQ3YBM2 270 aaPredicted RBP12.15□□□□□ -0.47
GPC1-209ENST00000495100 SLC25A30Q5SVS4 291 aa12.15□□□□□ -0.47
GPC1-209ENST00000495100 GLT8D1Q68CQ7 371 aa12.15□□□□□ -0.47
GPC1-209ENST00000495100 CREB3L2Q70SY1 520 aa12.15□□□□□ -0.47
GPC1-209ENST00000495100 OR11G2Q8NGC1 345 aa12.15□□□□□ -0.47
GPC1-209ENST00000495100 CYYR1Q96J86 154 aa12.15□□□□□ -0.47
GPC1-209ENST00000495100 ABHD6Q9BV23 337 aa12.15□□□□□ -0.47
GPC1-209ENST00000495100 OR51B6Q9H340 312 aa12.15□□□□□ -0.47
GPC1-209ENST00000495100 MRPS18AQ9NVS2 196 aaKnown RBP12.15□□□□□ -0.47
GPC1-209ENST00000495100 NTMQ9P121 344 aa12.15□□□□□ -0.47
GPC1-209ENST00000495100 PRR14LQ5THK1 2151 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 ZNF736B4DX44 427 aaPredicted RBP12.14□□□□□ -0.47
GPC1-209ENST00000495100 ZNF878C9JN71 531 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 TNFSF12O43508 249 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 IGF2P01344 180 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 HLA-DQB1P01920 261 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 PNMTP11086 282 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 GNB3P16520 340 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 CAPZBP47756 277 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 LIMK1P53667 647 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 YPEL5P62699 121 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 ESCO2Q56NI9 601 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 BRICD5Q6PL45 260 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 SLC16A9Q7RTY1 509 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 DND1Q8IYX4 353 aaKnown RBP12.14□□□□□ -0.47
GPC1-209ENST00000495100 MUC20Q8N307 709 aaPredicted RBP12.14□□□□□ -0.47
GPC1-209ENST00000495100 GABRG3Q99928 467 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 RBM24Q9BX46 236 aaKnown RBP12.14□□□□□ -0.47
GPC1-209ENST00000495100 SMIM3Q9BZL3 60 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 ISYNA1Q9NPH2 558 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 INPP5EQ9NRR6 644 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 A0A1W2PPC4 97 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 FAM221AA4D161 298 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 EFCAB7A8K855 629 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 RGS13O14921 159 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 TRAPPC6AO75865 159 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 MPC2O95563 127 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 ABOP16442 354 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 ABCD3P28288 659 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 BTCP35070 178 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 GPR3P46089 330 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 CLRN1P58418 232 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 RNASE10Q5GAN6 216 aaKnown RBP12.14□□□□□ -0.47
GPC1-209ENST00000495100 C1orf140Q5VVS0 124 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 STEAP1BQ6NZ63 245 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 OR2AJ1Q8NGZ0 328 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 OR1L3Q8NH93 324 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 FLVCR1-AS1Q8TAF5 88 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 PTPMT1Q8WUK0 201 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms