RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 RELNP78509 3460 aa17.02■□□□□ 0.31
USP39-218ENST00000493829 ADRA2AP08913 450 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 SBK2P0C263 348 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 ZNF823P16415 610 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 MSR1P21757 451 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 MVKQ03426 396 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 HIKESHIQ53FT3 197 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 CORO6Q6QEF8 472 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 BEND4Q6ZU67 534 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 TIGD4Q8IY51 512 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 RFLNBQ8N5W9 214 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 OR52I1Q8NGK6 324 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 COPS4Q9BT78 406 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 NELFAQ9H3P2 528 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 TAS2R16Q9NYV7 291 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 ERVK-18Q9QC07 812 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 TPRKBQ9Y3C4 175 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 ZNF462Q96JM2 2506 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 ESPL1Q14674 2120 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 CIB4A0PJX0 185 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 CCDC159P0C7I6 412 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 CHRNB4P30926 498 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 SLC15A1P46059 708 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 ENTPD1P49961 510 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 CDH15P55291 814 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 CXCR4P61073 352 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 MRPS34P82930 218 aaKnown RBP17.01■□□□□ 0.31
USP39-218ENST00000493829 FOXL2NBQ6ZUU3 175 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 MRGPRGQ86SM5 289 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 SLC35F2Q8IXU6 374 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 STX19Q8N4C7 294 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 SLC22A24Q8N4F4 322 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 OR1K1Q8NGR3 316 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 ZNF416Q9BWM5 594 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 PLCXD1Q9NUJ7 323 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 ERRFI1Q9UJM3 462 aaPredicted RBP17.01■□□□□ 0.31
USP39-218ENST00000493829 BLOC1S6Q9UL45 172 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 KLHDC2Q9Y2U9 406 aa17.01■□□□□ 0.31
USP39-218ENST00000493829 FAM208BQ5VWN6 2430 aa17■□□□□ 0.31
USP39-218ENST00000493829 MYO7BQ6PIF6 2116 aa17■□□□□ 0.31
USP39-218ENST00000493829 EFCAB10A6NFE3 127 aa17■□□□□ 0.31
USP39-218ENST00000493829 ZNF593O00488 134 aaPredicted RBP17■□□□□ 0.31
USP39-218ENST00000493829 MSTNO14793 375 aa17■□□□□ 0.31
USP39-218ENST00000493829 RPSAP08865 295 aaKnown RBP17■□□□□ 0.31
USP39-218ENST00000493829 PATE4P0C8F1 98 aa17■□□□□ 0.31
USP39-218ENST00000493829 COX5AP20674 150 aa17■□□□□ 0.31
USP39-218ENST00000493829 CAPZA2P47755 286 aa17■□□□□ 0.31
USP39-218ENST00000493829 BLVRAP53004 296 aa17■□□□□ 0.31
USP39-218ENST00000493829 TUBA1BP68363 451 aa17■□□□□ 0.31
USP39-218ENST00000493829 TUBA4AP68366 448 aa17■□□□□ 0.31
USP39-218ENST00000493829 ST3GAL4Q11206 333 aa17■□□□□ 0.31
USP39-218ENST00000493829 RAB40BQ12829 278 aa17■□□□□ 0.31
USP39-218ENST00000493829 POU4F2Q12837 409 aa17■□□□□ 0.31
USP39-218ENST00000493829 TMED1Q13445 227 aa17■□□□□ 0.31
USP39-218ENST00000493829 TUBA1AQ71U36 451 aa17■□□□□ 0.31
USP39-218ENST00000493829 DPY19L4Q7Z388 723 aa17■□□□□ 0.31
USP39-218ENST00000493829 CDADC1Q9BWV3 514 aa17■□□□□ 0.31
USP39-218ENST00000493829 CCDC90BQ9GZT6 254 aa17■□□□□ 0.31
USP39-218ENST00000493829 HAO2Q9NYQ3 351 aa17■□□□□ 0.31
USP39-218ENST00000493829 ASH2LQ9UBL3 628 aa17■□□□□ 0.31
USP39-218ENST00000493829 KCNG2Q9UJ96 466 aa17■□□□□ 0.31
USP39-218ENST00000493829 A0A1W2PR80 420 aa16.99■□□□□ 0.31
USP39-218ENST00000493829 NKX2-6A6NCS4 301 aa16.99■□□□□ 0.31
USP39-218ENST00000493829 ZG16O60844 167 aa16.99■□□□□ 0.31
USP39-218ENST00000493829 CNOT4O95628 575 aaKnown RBP16.99■□□□□ 0.31
USP39-218ENST00000493829 CSNK2BP67870 215 aa16.99■□□□□ 0.31
USP39-218ENST00000493829 ENDOGQ14249 297 aaKnown RBP16.99■□□□□ 0.31
USP39-218ENST00000493829 CDSNQ15517 529 aa16.99■□□□□ 0.31
USP39-218ENST00000493829 KLHL22Q53GT1 634 aa16.99■□□□□ 0.31
USP39-218ENST00000493829 TMEM154Q6P9G4 183 aa16.99■□□□□ 0.31
USP39-218ENST00000493829 SPATC1Q76KD6 591 aa16.99■□□□□ 0.31
USP39-218ENST00000493829 SLC16A9Q7RTY1 509 aa16.99■□□□□ 0.31
USP39-218ENST00000493829 ZNF433Q8N7K0 673 aaPredicted RBP16.99■□□□□ 0.31
USP39-218ENST00000493829 MARCH7Q9H992 704 aa16.99■□□□□ 0.31
USP39-218ENST00000493829 CNOT2Q9NZN8 540 aaKnown RBP16.99■□□□□ 0.31
USP39-218ENST00000493829 COPS3Q9UNS2 423 aa16.99■□□□□ 0.31
USP39-218ENST00000493829 C12orf71A8MTZ7 269 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 A8MXE2 369 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 TNFAIP8O95379 198 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 RAB36O95755 333 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 FADS2O95864 444 aaKnown RBP16.98■□□□□ 0.31
USP39-218ENST00000493829 OR8G3PP0DMU2 310 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 NPR2P20594 1047 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 SH3BGRP55822 239 aaPredicted RBP16.98■□□□□ 0.31
USP39-218ENST00000493829 SLC35A2P78381 396 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 EIF2B1Q14232 305 aaKnown RBP16.98■□□□□ 0.31
USP39-218ENST00000493829 STK11Q15831 433 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 SKA3Q8IX90 412 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 SIAEQ9HAT2 523 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 FKBP14Q9NWM8 211 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 GALNT8Q9NY28 637 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 EXOGQ9Y2C4 368 aaKnown RBP16.98■□□□□ 0.31
USP39-218ENST00000493829 LHFPL6Q9Y693 200 aa16.98■□□□□ 0.31
USP39-218ENST00000493829 FARS2O95363 451 aaKnown RBP16.97■□□□□ 0.31
USP39-218ENST00000493829 WNT11O96014 354 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 HRGP04196 525 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 PIPP12273 146 aaPredicted RBP16.97■□□□□ 0.31
USP39-218ENST00000493829 C21orf33P30042 268 aaPredicted RBP16.97■□□□□ 0.31
USP39-218ENST00000493829 TBRG1Q3YBR2 411 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 MTFR2Q6P444 385 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms