RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CDK16Q00536 496 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 IL1RL1Q01638 556 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 FUT5Q11128 374 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 PON2Q15165 354 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 RGNQ15493 299 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 PDK4Q16654 411 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 USH1GQ495M9 461 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 ORMDL2Q53FV1 153 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 HSP90AA5PQ58FG0 334 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 ANKRD22Q5VYY1 191 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 HCP5Q6MZN7 132 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 USP50Q70EL3 339 aaPredicted RBP0.66□□□□□ -2.3
CCDC93-209ENST00000488908 SNX20Q7Z614 316 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 CDKL3Q8IVW4 592 aaPredicted RBP0.66□□□□□ -2.3
CCDC93-209ENST00000488908 PUSL1Q8N0Z8 303 aaKnown RBP0.66□□□□□ -2.3
CCDC93-209ENST00000488908 TMEM123Q8N131 208 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 LIX1Q8N485 282 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 TMEM105Q8N8V8 129 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 SPANXA2-OT1Q8N9U9 137 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 FBXL13Q8NEE6 735 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 OR5M1Q8NGP8 315 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 KLF14Q8TD94 323 aaPredicted RBP0.66□□□□□ -2.3
CCDC93-209ENST00000488908 RLN3Q8WXF3 142 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 MS4A4EQ96PG1 132 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF317Q96PQ6 595 aaPredicted RBP0.66□□□□□ -2.3
CCDC93-209ENST00000488908 SLC38A2Q96QD8 506 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 RARRES2Q99969 163 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 THUMPD2Q9BTF0 503 aaKnown RBP0.66□□□□□ -2.3
CCDC93-209ENST00000488908 C1orf50Q9BV19 199 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 SMOXQ9NWM0 555 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 DHCR7Q9UBM7 475 aaKnown RBP0.66□□□□□ -2.3
CCDC93-209ENST00000488908 AURKCQ9UQB9 309 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 TMED5Q9Y3A6 229 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 CBY1Q9Y3M2 126 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 MRPS18BQ9Y676 258 aaKnown RBP0.66□□□□□ -2.3
CCDC93-209ENST00000488908 ATP8B3O60423 1300 aa0.65□□□□□ -2.3
CCDC93-209ENST00000488908 ANKRD12Q6UB98 2062 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 AHNAK2Q8IVF2 5795 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 A0A1W2PNN7 141 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 TMEM120BA0PK00 339 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 METTL21EPA6NDL7 271 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 OR6C70A6NIJ9 312 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 ZNF716A6NP11 495 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 ARPC3O15145 178 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 POLR1CO15160 346 aaPredicted RBP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 CHST10O43529 356 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 AIFM1O95831 613 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 UGT2B4P06133 528 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 RPA2P15927 270 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 CD1CP29017 333 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 GRIA1P42261 906 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 RFX3P48380 749 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 ZNF138P52744 262 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 FBXW4P57775 412 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 KRTAP12-1P59990 96 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 UBE2NP61088 152 aaKnown RBP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 NUTF2P61970 127 aaKnown RBP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 MRPL28Q13084 256 aaKnown RBP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 ZNF235Q14590 738 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 PHYHD1Q5SRE7 291 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 CCNJQ5T5M9 372 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 OR4F3Q6IEY1 312 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 SMARCD3Q6STE5 483 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 ENPP6Q6UWR7 440 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 Q6ZPB1 254 aaPredicted RBP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 LRRC74BQ6ZQY2 392 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 SLC16A13Q7RTY0 426 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 NT5DC3Q86UY8 548 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 TICAM2Q86XR7 235 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 VSTM4Q8IW00 320 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 WDFY1Q8IWB7 410 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 FAM83FQ8NEG4 500 aaPredicted RBP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 OR2L3Q8NG85 312 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 CIRBP-AS1Q8TBR5 109 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 PIFOQ8TCI5 191 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 CNDP1Q96KN2 507 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 IFT74Q96LB3 600 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 RPRD1AQ96P16 312 aaPredicted RBP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 STACQ99469 402 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 TIMM17AQ99595 171 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 COPS8Q99627 209 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 TCHPQ9BT92 498 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 ANGPTL4Q9BY76 406 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 RSPH9Q9H1X1 276 aaPredicted RBP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 PPA2Q9H2U2 334 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 RIBC2Q9H4K1 309 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 COQ10BQ9H8M1 238 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 RAB18Q9NP72 206 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 EXOSC4Q9NPD3 245 aaKnown RBP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 TAS2R3Q9NYW6 316 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 DDX49Q9Y6V7 483 aaKnown RBP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 SCN4AP35499 1836 aa0.65□□□□□ -2.31
CCDC93-209ENST00000488908 HELZ2Q9BYK8 2649 aaKnown RBP0.65□□□□□ -2.31
CCDC93-209ENST00000488908 OR6C74A6NCV1 312 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 BTNL10A8MVZ5 291 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 H0YJW9 148 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 HLA-DQB1P01920 261 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 ME2P23368 584 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms