RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 OR2W3Q7Z3T1 314 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 ZNF248Q8NDW4 579 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 BADQ92934 168 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 SLC41A2Q96JW4 573 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 SARGQ9BW04 601 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 SMIM3Q9BZL3 60 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 SELENOIQ9C0D9 397 aa11.52□□□□□ -0.56
VPS52-218ENST00000482399 SDK2Q58EX2 2172 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 A0A087WUJ7 227 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 CXorf51AA0A1B0GTR3 108 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 ZNF208O43345 1280 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 SCGB1D2O95969 90 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 TIMP1P01033 207 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 PMP2P02689 132 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 IL5P05113 134 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 BDKRB2P30411 391 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 OR1D4P47884 311 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 BAMBIQ13145 260 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 LCN10Q6JVE6 187 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 TRAPPC6BQ86SZ2 158 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 CA13Q8N1Q1 262 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 MRPS24Q96EL2 167 aaKnown RBP11.52□□□□□ -0.57
VPS52-218ENST00000482399 ZNF578Q96N58 590 aaPredicted RBP11.52□□□□□ -0.57
VPS52-218ENST00000482399 TMEM106CQ9BVX2 250 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 OR10A5Q9H207 317 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 FAM96BQ9Y3D0 163 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 TMEM14AQ9Y6G1 99 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 COL4A6Q14031 1691 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 LOC100289279A0A1B0GTE1 492 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 METTL21EPA6NDL7 271 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 TMEM212A6NML5 194 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 S100A9P06702 114 aaKnown RBP11.52□□□□□ -0.57
VPS52-218ENST00000482399 SLC2A1P11166 492 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 FGL1Q08830 312 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 CD226Q15762 336 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 SLC22A6Q4U2R8 563 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 TMEM200AQ86VY9 491 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 BCORP1Q8N888 145 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 PELOQ9BRX2 385 aaKnown RBP11.52□□□□□ -0.57
VPS52-218ENST00000482399 REG4Q9BYZ8 158 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 OR11A1Q9GZK7 315 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 ACKR4Q9NPB9 350 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 SLC17A4Q9Y2C5 497 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 ETV7Q9Y603 341 aa11.52□□□□□ -0.57
VPS52-218ENST00000482399 TMEM200CA6NKL6 621 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 P2RY10O00398 339 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 B3GALNT1O75752 331 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 CELA2BP08218 269 aaPredicted RBP11.51□□□□□ -0.57
VPS52-218ENST00000482399 GAAP10253 952 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 CNR1P21554 472 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 RPS27AP62979 156 aaKnown RBP11.51□□□□□ -0.57
VPS52-218ENST00000482399 UBA52P62987 128 aaKnown RBP11.51□□□□□ -0.57
VPS52-218ENST00000482399 HHEXQ03014 270 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 GUCA2BQ16661 112 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 Q6ZSR6 202 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 EID2Q8N6I1 236 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 OR6N1Q8NGY5 312 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 NUDT22Q9BRQ3 303 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 PBX4Q9BYU1 374 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 KNG1P01042 644 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 GLAP06280 429 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 SLC35E2P0CK97 266 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 RBM34P42696 430 aaKnown RBP11.51□□□□□ -0.57
VPS52-218ENST00000482399 NR0B1P51843 470 aaKnown RBP11.51□□□□□ -0.57
VPS52-218ENST00000482399 EXOSC6Q5RKV6 272 aaKnown RBP11.51□□□□□ -0.57
VPS52-218ENST00000482399 SLC18B1Q6NT16 456 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 OR10H5Q8NGA6 315 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 OR5D18Q8NGL1 313 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 OR1J4Q8NGS1 313 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 GPR119Q8TDV5 335 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 PHB2Q99623 299 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 JAM3Q9BX67 310 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 DNTTIP1Q9H147 329 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 ATPIF1Q9UII2 106 aa11.51□□□□□ -0.57
VPS52-218ENST00000482399 TMEM272A0A1B0GTI8 110 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 OR2M5A3KFT3 312 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 HOXB5P09067 269 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 SDHAP31040 664 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 RASGEF1BQ0VAM2 473 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 GPM6BQ13491 265 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 KCTD18Q6PI47 426 aaPredicted RBP11.5□□□□□ -0.57
VPS52-218ENST00000482399 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 OR13C9Q8NGT0 318 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 SLC37A2Q8TED4 501 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 ANKRD10Q9NXR5 420 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 RFPL4AA6NLU0 287 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 OR4C45A6NMZ5 311 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 METTL12A8MUP2 240 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 GPR89AB7ZAQ6 455 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 RFPL4AL1F8VTS6 287 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 NKX2-2O95096 273 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 PMS2P2O95744 297 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 MPIG6BO95866 241 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 SERPINA5P05154 406 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 GPR89BP0CG08 455 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 GLI4P10075 376 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 NPY4RP50391 375 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 MANEAQ5SRI9 462 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 NKAIN2Q5VXU1 208 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 WBP2NLQ6ICG8 309 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms