RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 FAM173BQ6P4H8 233 aa5.7□□□□□ -1.5
GAPVD1-217ENST00000479511 ZNF613Q6PF04 617 aa5.7□□□□□ -1.5
GAPVD1-217ENST00000479511 NAXDQ8IW45 347 aa5.7□□□□□ -1.5
GAPVD1-217ENST00000479511 NRMQ8IXM6 262 aa5.7□□□□□ -1.5
GAPVD1-217ENST00000479511 SPERTQ8NA61 448 aa5.7□□□□□ -1.5
GAPVD1-217ENST00000479511 VN1R17PQ8TDU5 208 aa5.7□□□□□ -1.5
GAPVD1-217ENST00000479511 BARHL1Q9BZE3 327 aa5.7□□□□□ -1.5
GAPVD1-217ENST00000479511 FOLH1BQ9HBA9 442 aa5.7□□□□□ -1.5
GAPVD1-217ENST00000479511 ROBO3Q96MS0 1386 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 LOC110117498-PIK3R3F6TDL0 507 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 CCL21O00585 134 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 SIVA1O15304 175 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 EDIL3O43854 480 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 KBTBD11O94819 623 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 NPPAP01160 153 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 IGHV2-5P01817 119 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 CLTAP09496 248 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 TRIM49P0CI25 452 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 TRIM49CP0CI26 452 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 IGLL1P15814 213 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 PTNP21246 168 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 SERTAD2Q14140 314 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 SAMD4BQ5PRF9 694 aaKnown RBP5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 CXCL17Q6UXB2 119 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 ZNF600Q6ZNG1 722 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 HIPK1Q86Z02 1210 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 ZNF100Q8IYN0 542 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 IQCKQ8N0W5 287 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 ZNF564Q8TBZ8 553 aaPredicted RBP5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 ACER1Q8TDN7 264 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 RAB1CQ92928 201 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 TMEM246Q9BRR3 403 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 ACTR6Q9GZN1 396 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 PORCNQ9H237 461 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 RNF167Q9H6Y7 350 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 CWH43Q9H720 699 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 LZTFL1Q9NQ48 299 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 MYH7P12883 1935 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 FAM208BQ5VWN6 2430 aa5.69□□□□□ -1.5
GAPVD1-217ENST00000479511 MYO9BQ13459 2157 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 A0A0J9YYE9 177 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 LOC100653049A0A140TA62 436 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 SMIM28A0A1B0GU29 152 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 ZNF99A8MXY4 864 aaPredicted RBP5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 LAD1O00515 517 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 KRT34O76011 436 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 TRBC1P01850 177 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 FGGP02679 453 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 SHMT2P34897 504 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 HSD17B2P37059 387 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 GPM6AP51674 278 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 NDUFA8P51970 172 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 CRIP2P52943 208 aaPredicted RBP5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 CRISP1P54107 249 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 ORC2Q13416 577 aaPredicted RBP5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 RUNX3Q13761 415 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 ZNF829Q3KNS6 432 aaPredicted RBP5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 SLC22A6Q4U2R8 563 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 KLF17Q5JT82 389 aaPredicted RBP5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 LIN9Q5TKA1 542 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 RESP18Q5W5W9 173 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 OR5M10Q6IEU7 315 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 C1orf94Q6P1W5 598 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 TRIM40Q6P9F5 258 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 SCARA5Q6ZMJ2 495 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 MBOAT1Q6ZNC8 495 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 FTMTQ8N4E7 242 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 C8orf31Q8N9H6 132 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 CHCHD10Q8WYQ3 142 aaPredicted RBP5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 GNB4Q9HAV0 340 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 TMEM165Q9HC07 324 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 C6orf50Q9HD87 102 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 GIN1Q9NXP7 522 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 B4GALT7Q9UBV7 327 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 MMP17Q9ULZ9 603 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 UBQLN1Q9UMX0 589 aaKnown RBP5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 GPR179Q6PRD1 2367 aa5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 BAZ2AQ9UIF9 1905 aaKnown RBP5.68□□□□□ -1.5
GAPVD1-217ENST00000479511 UNC79Q9P2D8 2635 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 ZNF236Q9UL36 1845 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 DHRS7CA6NNS2 312 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 SERPINE3A8MV23 424 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 ZG16O60844 167 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 CNMDO75829 334 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 CLPXO76031 633 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 ERLIN2O94905 339 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 SLC25A27O95847 323 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 FGF1P05230 155 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 STSP08842 583 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 UBTFL6P0CB48 400 aaPredicted RBP5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 LONP1P36776 959 aaKnown RBP5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 SLC1A1P43005 524 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 MAGEA9P43362 315 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 CX3CR1P49238 355 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 MRPL19P49406 292 aaKnown RBP5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 RAD51Q06609 339 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 ARL6IP1Q15041 203 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 XKR4Q5GH76 650 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 MLIPQ5VWP3 458 aa5.67□□□□□ -1.5
GAPVD1-217ENST00000479511 ZNF343Q6P1L6 599 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms