RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 TRAV40A0A0B4J280 105 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 IQCMA0A1B0GVH7 501 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 WDR91A4D1P6 747 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 TMEM247A6NEH6 219 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 CEACAM18A8MTB9 384 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 SRRM5B3KS81 715 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 H3BSA7 217 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 BIRC5O15392 142 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 TPST1O60507 370 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 TPST2O60704 377 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 NDUFA7O95182 113 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 ANP32DO95626 131 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 TSPAN15O95858 294 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 MT-ATP6P00846 226 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 NGFP01138 241 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 IGHG1P01857 330 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 IL6P05231 212 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 QDPRP09417 244 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 SELEP16581 610 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 HOXB9P17482 250 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 CCNOP22674 350 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 STOMP27105 288 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 EPHA3P29320 983 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 APLNRP35414 380 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 LIPAP38571 399 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC1A6P48664 564 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 IDH3AP50213 366 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 CDH12P55289 794 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 RGS8P57771 180 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 NCALDP61601 193 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 BTG1P62324 171 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 HSF2Q03933 536 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 PLP2Q04941 152 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 FADDQ13158 208 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 MELKQ14680 651 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 ZMYND11Q15326 602 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 RGNQ15493 299 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 OR1Q1Q15612 314 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 HIST3H3Q16695 136 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 DEFB112Q30KQ8 113 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF718Q3SXZ3 478 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 ESCO2Q56NI9 601 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 ZMAT1Q5H9K5 638 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 PABPC1L2AQ5JQF8 200 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF362Q5T0B9 420 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 ASPHD2Q6ICH7 369 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF774Q6NX45 483 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 DHRS4L2Q6PKH6 230 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 MSANTD1Q6ZTZ1 278 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 RFPL4BQ6ZWI9 263 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 LRRC28Q86X40 367 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 C1QL4Q86Z23 238 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 KIRREL3Q8IZU9 778 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 LRRC18Q8N456 261 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 KLHL36Q8N4N3 616 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 C10orf53Q8N6V4 93 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC25A40Q8TBP6 338 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 UBE2FQ969M7 185 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 MCHR2Q969V1 340 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 ITCHQ96J02 903 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 POM121L2Q96KW2 1035 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 DCLRE1CQ96SD1 692 aaKnown RBP4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 SEPHS2Q99611 448 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 ARHGDIGQ99819 225 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 RBM4BQ9BQ04 359 aaKnown RBP4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 PRDM13Q9H4Q3 707 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 MSL2Q9HCI7 577 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 CYSLTR2Q9NS75 346 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 TMEM106BQ9NUM4 274 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 PNPOQ9NVS9 261 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 TAS2R5Q9NYW4 299 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 SELENONQ9NZV5 590 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 OR5V1Q9UGF6 321 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 ZDHHC8Q9ULC8 765 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 LRCH1Q9Y2L9 728 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 DNAH1Q9P2D7 4330 aa4.3□□□□□ -1.72
SNRNP40-204ENST00000474025 IGHV2-70DA0A0C4DH43 119 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 SCO2A0A1W2PP80 73 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 CLPSL1A2RUU4 121 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 C5orf49A4QMS7 147 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC22A31A6NKX4 558 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 C5orf58C9J3I9 102 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 CLIC1O00299 241 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 RNF13O43567 381 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 MGRN1O60291 552 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC22A3O75751 556 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 OR6A2O95222 327 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 LYPD3O95274 346 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 TGDSO95455 350 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 WNT2P09544 360 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 IDO1P14902 403 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF32P17041 273 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 BGNP21810 368 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 GSTT1P30711 240 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 MDH2P40926 338 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF84P51523 738 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF133P52736 654 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 CLRN1P58418 232 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 PPP1CBP62140 327 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 TNFAIP6P98066 277 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms