RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 DEAF1O75398 565 aaPredicted RBP17.91■□□□□ 0.46
COL9A3-207ENST00000467819 AVPP01185 164 aa17.91■□□□□ 0.46
COL9A3-207ENST00000467819 GDI2P50395 445 aaKnown RBP17.91■□□□□ 0.46
COL9A3-207ENST00000467819 ACTG1P63261 375 aa17.91■□□□□ 0.46
COL9A3-207ENST00000467819 PSG4Q00888 419 aa17.91■□□□□ 0.46
COL9A3-207ENST00000467819 ALG10Q5BKT4 473 aa17.91■□□□□ 0.46
COL9A3-207ENST00000467819 TMEM255AQ5JRV8 349 aa17.91■□□□□ 0.46
COL9A3-207ENST00000467819 ERICH5Q6P6B1 374 aa17.91■□□□□ 0.46
COL9A3-207ENST00000467819 SLC25A47Q6Q0C1 308 aa17.91■□□□□ 0.46
COL9A3-207ENST00000467819 CLDN22Q8N7P3 220 aa17.91■□□□□ 0.46
COL9A3-207ENST00000467819 SLC25A40Q8TBP6 338 aa17.91■□□□□ 0.46
COL9A3-207ENST00000467819 ZFAND2BQ8WV99 257 aa17.91■□□□□ 0.46
COL9A3-207ENST00000467819 ELMOD3Q96FG2 381 aa17.91■□□□□ 0.46
COL9A3-207ENST00000467819 TIMD4Q96H15 378 aa17.91■□□□□ 0.46
COL9A3-207ENST00000467819 A0A0G2JMP0 313 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 A0A0X1KG70 313 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 NPIPB13A6NJU9 1138 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 NPIPB4C9JG80 1138 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 IFNA14P01570 189 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 IGHV1-46P01743 117 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 IGHV2-5P01817 119 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 THRBP10828 461 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 NR2C1P13056 603 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 IFI30P13284 250 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 CFPP27918 469 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 SF3A3Q12874 501 aaKnown RBP eCLIP17.9■□□□□ 0.463e-6■■■□□ 18.4
COL9A3-207ENST00000467819 CYBRD1Q53TN4 286 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 FAM209AQ5JX71 171 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 RFPL4BQ6ZWI9 263 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 IGFN1Q86VF2 1251 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 OR4M2Q8NGB6 313 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 C10orf82Q8WW14 230 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 CCL17Q92583 94 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 RAB1CQ92928 201 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 MARS2Q96GW9 593 aaKnown RBP17.9■□□□□ 0.46
COL9A3-207ENST00000467819 TPD52L3Q96J77 140 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 ZNF583Q96ND8 569 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 TMPRSS13Q9BYE2 586 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 OR2J1Q9GZK6 312 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 PCDHB10Q9UN67 800 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 HIF3AQ9Y2N7 669 aa17.9■□□□□ 0.46
COL9A3-207ENST00000467819 PLSCR5A0PG75 271 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 GMNCA6NCL1 334 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 ZSCAN5BA6NJL1 495 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 LAP3P28838 519 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 MMP15P51511 669 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 RPL27P61353 136 aaKnown RBP17.89■□□□□ 0.45
COL9A3-207ENST00000467819 UNQ6126/PRO20091Q6UXV3 157 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 HDXQ7Z353 690 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 MICU2Q8IYU8 434 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 TEX29Q8N6K0 151 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 ABHD4Q8TB40 342 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 KLF14Q8TD94 323 aaPredicted RBP17.89■□□□□ 0.45
COL9A3-207ENST00000467819 BPIFA2Q96DR5 249 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 GAL3ST1Q99999 423 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 ALG12Q9BV10 488 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 OR2H1Q9GZK4 316 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 WNT5BQ9H1J7 359 aa17.89■□□□□ 0.45
COL9A3-207ENST00000467819 A0A1W2PPL8 197 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 ISPDA4D126 451 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 ADRA2CP18825 462 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 KDELR2P33947 212 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 CTXN1P60606 82 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 PPP1CBP62140 327 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 ST3GAL3Q11203 375 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 KLF10Q13118 480 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 TAF11Q15544 211 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 COQ5Q5HYK3 327 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 FAM27BQ5VT28 67 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 DCAF12L2Q5VW00 463 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 PRRC1Q96M27 445 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 RBP7Q96R05 134 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 A4GNTQ9UNA3 340 aa17.88■□□□□ 0.45
COL9A3-207ENST00000467819 TRAV27A0A087WT01 109 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 BBIP1A8MTZ0 92 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 FAM220BPB1ANY3 271 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 NGFP01138 241 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 CST2P09228 141 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 FUT4P22083 530 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 YAP1P46937 504 aaKnown RBP17.87■□□□□ 0.45
COL9A3-207ENST00000467819 HILS1P60008 231 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 MBNL2Q5VZF2 373 aaKnown RBP17.87■□□□□ 0.45
COL9A3-207ENST00000467819 ZNF774Q6NX45 483 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 C1QL2Q7Z5L3 287 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 PEG10Q86TG7 708 aaKnown RBP17.87■□□□□ 0.45
COL9A3-207ENST00000467819 ALDH16A1Q8IZ83 802 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 GEMIN6Q8WXD5 167 aaKnown RBP17.87■□□□□ 0.45
COL9A3-207ENST00000467819 EGLN1Q9GZT9 426 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 UBAP1Q9NZ09 502 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 RHCGQ9UBD6 479 aa17.87■□□□□ 0.45
COL9A3-207ENST00000467819 LOC100653049A0A140TA62 436 aa17.86■□□□□ 0.45
COL9A3-207ENST00000467819 KRT34O76011 436 aa17.86■□□□□ 0.45
COL9A3-207ENST00000467819 NPPAP01160 153 aa17.86■□□□□ 0.45
COL9A3-207ENST00000467819 IGHMP01871 453 aa17.86■□□□□ 0.45
COL9A3-207ENST00000467819 IFNA8P32881 189 aa17.86■□□□□ 0.45
COL9A3-207ENST00000467819 GUCA1AP43080 201 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-207ENST00000467819 HNRNPA0Q13151 305 aaKnown RBP17.86■□□□□ 0.45
COL9A3-207ENST00000467819 MAPRE2Q15555 327 aa17.86■□□□□ 0.45
COL9A3-207ENST00000467819 SPRNQ5BIV9 151 aa17.86■□□□□ 0.45
COL9A3-207ENST00000467819 OR2T12Q8NG77 320 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms