RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 TTLL8A6PVC2 850 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 CD300LBA8K4G0 201 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 C1orf196B1AJZ1 125 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 K7EPK0 472 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 YKT6O15498 198 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 CTSVO60911 334 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 NKX2-2O95096 273 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 GABRB1P18505 474 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 FKBP2P26885 142 aaKnown RBP13.46□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF529Q6P280 563 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 FAM71E2Q8N5Q1 922 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 OR10K1Q8NGX5 313 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 SIRT3Q9NTG7 399 aaPredicted RBP13.46□□□□□ -0.26
PTPRU-205ENST00000460170 C1orf123Q9NWV4 160 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 B3GNT2Q9NY97 397 aa13.46□□□□□ -0.26
PTPRU-205ENST00000460170 MN1Q10571 1320 aaPredicted RBP13.46□□□□□ -0.26
PTPRU-205ENST00000460170 FBXO24O75426 580 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 LALBAP00709 142 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 GLULP15104 373 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 SPNP16150 400 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 MICU1Q9BPX6 476 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 KCND3Q9UK17 655 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 PADI1Q9ULC6 663 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 A0A0A6YYJ9 748 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 PRSS37A4D1T9 235 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 OR2W5A6NFC9 320 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 HSPB2A8KAH6 182 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 EPXP11678 715 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 GABRG2P18507 467 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 PNLIPRP2P54317 469 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 HSPB2Q16082 182 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 C1orf53Q5VUE5 145 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 PPP1R35Q8TAP8 253 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 ST8SIA1Q92185 356 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 HINT2Q9BX68 163 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 SULT1C2O00338 296 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 GIPP09681 153 aaPredicted RBP13.45□□□□□ -0.26
PTPRU-205ENST00000460170 GCH1P30793 250 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 SELENBP1Q13228 472 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF169Q14929 603 aaPredicted RBP13.45□□□□□ -0.26
PTPRU-205ENST00000460170 STAC2Q6ZMT1 411 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 RPS19BP1Q86WX3 136 aaKnown RBP13.45□□□□□ -0.26
PTPRU-205ENST00000460170 C10orf111Q8N326 155 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 TRAV1-2A0A0B4J238 106 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 A0A0B4J2A0 478 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 PMP2P02689 132 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 PDGFAP04085 211 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 LIMS3P0CW19 117 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 LIMS4P0CW20 117 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 KIR2DL3P43628 341 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 GZMKP49863 264 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 ACSM1Q08AH1 577 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 EXT1Q16394 746 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 PSMF1Q92530 271 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 OR5B12Q96R08 314 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 TXNIPQ9H3M7 391 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 SHPKQ9UHJ6 478 aa13.45□□□□□ -0.26
PTPRU-205ENST00000460170 ASCC3Q8N3C0 2202 aaKnown RBP13.45□□□□□ -0.26
PTPRU-205ENST00000460170 FRG2CA6NGY1 282 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 GPR171O14626 319 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 PRAMEF4O60810 478 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 MFGE8Q08431 387 aaPredicted RBP13.44□□□□□ -0.26
PTPRU-205ENST00000460170 BTN1A1Q13410 526 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF845Q96IR2 970 aaPredicted RBP13.44□□□□□ -0.26
PTPRU-205ENST00000460170 OR2A5Q96R48 311 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 GSX2Q9BZM3 304 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 A0A087WUJ7 227 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 A0A0B4J2E0 115 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 A0A1B0GX12 115 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 DSCR3O14972 297 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 SRFP11831 508 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 RPL23AP62750 156 aaKnown RBP13.44□□□□□ -0.26
PTPRU-205ENST00000460170 ATOH1Q92858 354 aaPredicted RBP13.44□□□□□ -0.26
PTPRU-205ENST00000460170 SLAMF6Q96DU3 332 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 ARPC5LQ9BPX5 153 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 SLC25A31Q9H0C2 315 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 HRASLSQ9HDD0 168 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 NOSIPQ9Y314 301 aaKnown RBP13.44□□□□□ -0.26
PTPRU-205ENST00000460170 ATAD5Q96QE3 1844 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 WNK3Q9BYP7 1800 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 SLC34A2O95436 690 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 SLC25A35Q3KQZ1 300 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 OR2G2Q8NGZ5 317 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 TCEAL3Q969E4 200 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 PIGTQ969N2 578 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 S1PR5Q9H228 398 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 TMEM200CA6NKL6 621 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 SNAPINO95295 136 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 IRF2P14316 349 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 EIF2S3P41091 472 aaKnown RBP13.44□□□□□ -0.26
PTPRU-205ENST00000460170 RPS18P62269 152 aaKnown RBP13.44□□□□□ -0.26
PTPRU-205ENST00000460170 IL10RAQ13651 578 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 MDGA2Q7Z553 956 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 WDFY2Q96P53 400 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 UTP23Q9BRU9 249 aaKnown RBP13.44□□□□□ -0.26
PTPRU-205ENST00000460170 POFUT1Q9H488 388 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 RPS10P5Q9NQ39 176 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 LUZP4Q9P127 313 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 KCNG2Q9UJ96 466 aa13.44□□□□□ -0.26
PTPRU-205ENST00000460170 GREB1LQ9C091 1923 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms