RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 TMIGD3P0DMS9 266 aaPredicted RBP11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 CTLA4P16410 223 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 OR1D5P58170 312 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 ACTBP60709 375 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 ACTG1P63261 375 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 GLO1Q04760 184 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 EXOSC2Q13868 293 aaKnown RBP11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 GRK1Q15835 563 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 C2orf76Q3KRA6 126 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 ARHGAP40Q5TG30 622 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 SLC25A25Q6KCM7 469 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 RHBDD2Q6NTF9 364 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 MAMSTRQ6ZN01 415 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 TMEM229BQ8NBD8 167 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 CLEC1AQ8NC01 280 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 NFAM1Q8NET5 270 aaPredicted RBP11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 SLC26A10Q8NG04 563 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 OR51D1Q8NGF3 324 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 OR6M1Q8NGM8 313 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 CEP76Q8TAP6 659 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 NUBPLQ8TB37 319 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 TSEN15Q8WW01 171 aaKnown RBP11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 ASB10Q8WXI3 467 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 SMAD5Q99717 465 aaKnown RBP11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 SEC22CQ9BRL7 303 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 POTEKPQ9BYX7 375 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 NRSN2Q9GZP1 204 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 MED9Q9NWA0 146 aa11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 MRPS17Q9Y2R5 130 aaKnown RBP11.25□□□□□ -0.61
ECHDC1-209ENST00000454591 PCNX3Q9H6A9 2034 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 IGLV3-32A0A0A0MS00 114 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 TMEM272A0A1B0GTI8 110 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 TEX51A0A1B0GUA7 166 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 C11orf98E9PRG8 122 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 H0YC42 278 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 MS4A18H0YCH9 400 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 CYC1P08574 325 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 GIMD1P0DJR0 217 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 RAB6AP20340 208 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 M6PRP20645 277 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 CCKBRP32239 447 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 PRSS3P35030 304 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 DAP3P51398 398 aaKnown RBP11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 ZNF81P51508 661 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 GPR85P60893 370 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 PSMA6P60900 246 aaKnown RBP11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 RNF4P78317 190 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 C17orf67Q0P5P2 114 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 PLA2G7Q13093 441 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 MS4A18Q3C1V0 323 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 PCGF3Q3KNV8 242 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 VWA2Q5GFL6 755 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 ZNF704Q6ZNC4 412 aaPredicted RBP11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 LRRC69Q6ZNQ3 347 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 RABEPKQ7Z6M1 372 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 KRT77Q7Z794 578 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 BIVMQ86UB2 503 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 CCDC28AQ8IWP9 274 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 FTMTQ8N4E7 242 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 MEIOBQ8N635 442 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 ADPRHL1Q8NDY3 354 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 OR1J4Q8NGS1 313 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 OR8K3Q8NH51 312 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 EDAQ92838 391 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 PNPLA2Q96AD5 504 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 DACT3Q96B18 629 aaPredicted RBP11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 FOXRED1Q96CU9 486 aaPredicted RBP11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 RBP7Q96R05 134 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 ZNF587Q96SQ5 575 aaPredicted RBP11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 KCNK17Q96T54 332 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 G6PC2Q9NQR9 355 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 CKLFQ9UBR5 152 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 HHLA2Q9UM44 414 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 DHDHQ9UQ10 334 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 RHBDD3Q9Y3P4 386 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 LRP12Q9Y561 859 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 MAB21L2Q9Y586 359 aa11.24□□□□□ -0.61
ECHDC1-209ENST00000454591 A0A1W2PNV4 684 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 A0A1W2PQ72 361 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 PYCARD-AS1I3L0S3 204 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 WISP1O95388 367 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 NUDT14O95848 222 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 GPANK1O95872 356 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 CD74P04233 296 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 ITGB2P05107 769 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 VSIG10L2P0DP72 767 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 MPZP25189 248 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 MSX1P28360 303 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 CALCRP30988 508 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 RPS27P42677 84 aaKnown RBP11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 ARRB1P49407 418 aaPredicted RBP11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 EFNB2P52799 333 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 ADAM8P78325 824 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 MFGE8Q08431 387 aaPredicted RBP11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 EIF2B1Q14232 305 aaKnown RBP11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 TMEM244Q5VVB8 128 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 NHLRC1Q6VVB1 395 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 H1FNTQ75WM6 255 aaPredicted RBP11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 NKAIN3Q8N8D7 197 aa11.23□□□□□ -0.61
ECHDC1-209ENST00000454591 ZNF248Q8NDW4 579 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms