RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 NPSR1Q6W5P4 371 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 C5orf24Q7Z6I8 188 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 OR4S1Q8NGB4 309 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 TMEM239Q8WW34 195 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 ALG14Q96F25 216 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 CDCA3Q99618 268 aaPredicted RBP16.91■□□□□ 0.3
PTPA-223ENST00000452489 ADAM19Q9H013 955 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 SYT4Q9H2B2 425 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 VSX1Q9NZR4 365 aaPredicted RBP16.91■□□□□ 0.3
PTPA-223ENST00000452489 USP36Q9P275 1121 aaKnown RBP16.91■□□□□ 0.3
PTPA-223ENST00000452489 PRG3Q9Y2Y8 225 aaPredicted RBP16.91■□□□□ 0.3
PTPA-223ENST00000452489 COL4A3Q01955 1670 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 SLC5A10A0PJK1 596 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 OR5H15A6NDH6 313 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 OR5H1A6NKK0 313 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 ZNF25P17030 456 aaPredicted RBP16.91■□□□□ 0.3
PTPA-223ENST00000452489 MPZP25189 248 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 MAS1LP35410 378 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 BEX3Q00994 111 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 EBPQ15125 230 aaKnown RBP16.91■□□□□ 0.3
PTPA-223ENST00000452489 CTXN3Q4LDR2 81 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 SLC25A42Q86VD7 318 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 ZNF610Q8N9Z0 462 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 GALNT14Q96FL9 552 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 JSRP1Q96MG2 331 aaPredicted RBP16.91■□□□□ 0.3
PTPA-223ENST00000452489 MSRAQ9UJ68 235 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 ICAM5Q9UMF0 924 aa16.91■□□□□ 0.3
PTPA-223ENST00000452489 TRBV23OR9-2A0A075B6M9 112 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 A0A1B0GTH9 108 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 TMEM235A6NFC5 223 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 ZNF587BE7ETH6 402 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 TMEM127O75204 238 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 MRPS6P82932 125 aaKnown RBP16.9■□□□□ 0.3
PTPA-223ENST00000452489 Q499Y3 187 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 CCDC116Q8IYX3 515 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 TMEM229BQ8NBD8 167 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 ADAD2Q8NCV1 583 aaKnown RBP16.9■□□□□ 0.3
PTPA-223ENST00000452489 OR7G2Q8NG99 324 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 BPIFA2Q96DR5 249 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 SPOCK3Q9BQ16 436 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 NDUFAF3Q9BU61 184 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 TWSG1Q9GZX9 223 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 TAF9BQ9HBM6 251 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 UBQLN4Q9NRR5 601 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 B4GALT6Q9UBX8 382 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 A0A1B0GVT2 93 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 A0A1W2PPC1 479 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 RPL36A-HNRNPH2H7BZ11 118 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 IL2RGP31785 369 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 TSPAN7P41732 249 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 TSFMP43897 325 aaKnown RBP16.9■□□□□ 0.3
PTPA-223ENST00000452489 RHEBQ15382 184 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 DNLZQ5SXM8 178 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 APOBEC3FQ8IUX4 373 aaKnown RBP16.9■□□□□ 0.3
PTPA-223ENST00000452489 OR2L5Q8NG80 312 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 LCN9Q8WX39 176 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 MRGPRFQ96AM1 343 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 S100A13Q99584 98 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 OPN3Q9H1Y3 402 aaPredicted RBP16.9■□□□□ 0.3
PTPA-223ENST00000452489 PLAGL1Q9UM63 463 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 FLVCR1Q9Y5Y0 555 aa16.9■□□□□ 0.3
PTPA-223ENST00000452489 FEZF1A0PJY2 475 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 ZNF736B4DX44 427 aaPredicted RBP16.89■□□□□ 0.29
PTPA-223ENST00000452489 AK1P00568 194 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 AKR1C4P17516 323 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 SULT1A2P50226 295 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 ZNF136P52737 540 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 C14orf28Q4W4Y0 310 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 ZNF529Q6P280 563 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 TMEM150AQ86TG1 271 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 OR10AC1Q8NH08 325 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 MS4A8Q9BY19 250 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 LMAN2LQ9H0V9 348 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 RIMS4Q9H426 269 aaPredicted RBP16.89■□□□□ 0.29
PTPA-223ENST00000452489 PARP11Q9NR21 331 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 ZNF443Q9Y2A4 671 aaPredicted RBP16.89■□□□□ 0.29
PTPA-223ENST00000452489 POMT1Q9Y6A1 747 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 TBC1D3BA6NDS4 549 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 ADAP1O75689 374 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 IL2RAP01589 272 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 TBC1D3HP0C7X1 549 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 MLC1Q15049 377 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 TBC1D3GQ6DHY5 549 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 ZNF627Q7L945 461 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 ZNF563Q8TA94 476 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 TNFRSF13CQ96RJ3 184 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 LGR4Q9BXB1 951 aa16.89■□□□□ 0.29
PTPA-223ENST00000452489 SRPX2O60687 465 aaPredicted RBP16.88■□□□□ 0.29
PTPA-223ENST00000452489 HIST1H1CP16403 213 aaKnown RBP16.88■□□□□ 0.29
PTPA-223ENST00000452489 RAB4AP20338 218 aa16.88■□□□□ 0.29
PTPA-223ENST00000452489 GJA4P35212 333 aa16.88■□□□□ 0.29
PTPA-223ENST00000452489 CD200P41217 278 aa16.88■□□□□ 0.29
PTPA-223ENST00000452489 ELOCQ15369 112 aa16.88■□□□□ 0.29
PTPA-223ENST00000452489 ZNF343Q6P1L6 599 aa16.88■□□□□ 0.29
PTPA-223ENST00000452489 OR51A4Q8NGJ6 313 aa16.88■□□□□ 0.29
PTPA-223ENST00000452489 RPS4Y2Q8TD47 263 aa16.88■□□□□ 0.29
PTPA-223ENST00000452489 DTD1Q8TEA8 209 aa16.88■□□□□ 0.29
PTPA-223ENST00000452489 WNT5BQ9H1J7 359 aa16.88■□□□□ 0.29
PTPA-223ENST00000452489 PRSS16Q9NQE7 514 aa16.88■□□□□ 0.29
PTPA-223ENST00000452489 TRPV2Q9Y5S1 764 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms