RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 CTXN1P60606 82 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 LMO4P61968 165 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 MVKQ03426 396 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 TSTQ16762 297 aaKnown RBP17.94■□□□□ 0.46
VSX1-206ENST00000444511 ZNF718Q3SXZ3 478 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 SPATA46Q5T0L3 261 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 AVPI1Q5T686 147 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 FAM27BQ5VT28 67 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 FAM205BPQ63HN1 556 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 SHQ1Q6PI26 577 aaKnown RBP17.94■□□□□ 0.46
VSX1-206ENST00000444511 IGFN1Q86VF2 1251 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 ZNF101Q8IZC7 436 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 GTF3AQ92664 365 aaKnown RBP17.94■□□□□ 0.46
VSX1-206ENST00000444511 RCN3Q96D15 328 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 LRRC37BQ96QE4 947 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 FNDC11Q9BVV2 318 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 OCEL1Q9H607 264 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 METTL17Q9H7H0 456 aaPredicted RBP17.94■□□□□ 0.46
VSX1-206ENST00000444511 RHCGQ9UBD6 479 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 AP3M1Q9Y2T2 418 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 LOC100509620A0A075B734 347 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 HAX1O00165 279 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 IGHMP01871 453 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 ANPEPP15144 967 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 ITGA2P17301 1181 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 MAKP20794 623 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 LAP3P28838 519 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 WNT5AP41221 380 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 ZNF81P51508 661 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 PSG4Q00888 419 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 TRAM2Q15035 370 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 USP51Q70EK9 711 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 ARPINQ7Z6K5 226 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 VTCN1Q7Z7D3 282 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 NRMQ8IXM6 262 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 ALDH16A1Q8IZ83 802 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 OFCC1Q8IZS5 231 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 CLDN22Q8N7P3 220 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 OR51A7Q8NH64 312 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 SAP30LQ9HAJ7 183 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 CMTM6Q9NX76 183 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 ARMCX1Q9P291 453 aa17.93■□□□□ 0.46
VSX1-206ENST00000444511 TRAV27A0A087WT01 109 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 TRAV20A0A0B4J274 112 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 A0A1W2PPL8 197 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 PLSCR5A0PG75 271 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 A6NIZ1 184 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 EFCAB9A8MZ26 197 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 CLDN25C9JDP6 229 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 SLC22A2O15244 555 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 CST2P09228 141 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 RAP1BP61224 184 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 PCBD1P61457 104 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 RAP1AP62834 184 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 SCGB2A2Q13296 93 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 HFEQ30201 348 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 OAFQ86UD1 273 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 MEX3DQ86XN8 651 aaKnown RBP17.92■□□□□ 0.46
VSX1-206ENST00000444511 POU5F2Q8N7G0 328 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 IPCEF1Q8WWN9 437 aaPredicted RBP17.92■□□□□ 0.46
VSX1-206ENST00000444511 OR2H1Q9GZK4 316 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 ZNF665Q9H7R5 613 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 TIMM10BQ9Y5J6 103 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 SNX13Q9Y5W8 968 aa17.92■□□□□ 0.46
VSX1-206ENST00000444511 J3KTA2 159 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 GSTA4O15217 222 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 SPRY3O43610 288 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 ZNF682O95780 498 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 MPV17P39210 176 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 LIPEQ05469 1076 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 PRKCDQ05655 676 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 ANKDD1AQ495B1 522 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 FAM209AQ5JX71 171 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 ACSM5Q6NUN0 579 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 FAHD2BQ6P2I3 314 aaPredicted RBP17.91■□□□□ 0.46
VSX1-206ENST00000444511 C1orf174Q8IYL3 243 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 LRRC75AQ8NAA5 344 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 RP9Q8TA86 221 aaKnown RBP17.91■□□□□ 0.46
VSX1-206ENST00000444511 ABHD4Q8TB40 342 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 SLC25A40Q8TBP6 338 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 GEMIN6Q8WXD5 167 aaKnown RBP17.91■□□□□ 0.46
VSX1-206ENST00000444511 RAB39BQ96DA2 213 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 ELMOD3Q96FG2 381 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 FAHD2AQ96GK7 314 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 MARS2Q96GW9 593 aaKnown RBP17.91■□□□□ 0.46
VSX1-206ENST00000444511 TIMD4Q96H15 378 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 OR2J1Q9GZK6 312 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 WNT5BQ9H1J7 359 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 MAN2C1Q9NTJ4 1040 aa17.91■□□□□ 0.46
VSX1-206ENST00000444511 GMPR2Q9P2T1 348 aaKnown RBP17.91■□□□□ 0.46
VSX1-206ENST00000444511 CXCR6O00574 342 aa17.9■□□□□ 0.46
VSX1-206ENST00000444511 MSR1P21757 451 aa17.9■□□□□ 0.46
VSX1-206ENST00000444511 FUT4P22083 530 aa17.9■□□□□ 0.46
VSX1-206ENST00000444511 SLC9A3P48764 834 aa17.9■□□□□ 0.46
VSX1-206ENST00000444511 PPP1CBP62140 327 aa17.9■□□□□ 0.46
VSX1-206ENST00000444511 IFI44LQ53G44 452 aa17.9■□□□□ 0.46
VSX1-206ENST00000444511 MBNL2Q5VZF2 373 aaKnown RBP17.9■□□□□ 0.46
VSX1-206ENST00000444511 ZNF730Q6ZMV8 503 aa17.9■□□□□ 0.46
VSX1-206ENST00000444511 RFPL4BQ6ZWI9 263 aa17.9■□□□□ 0.46
VSX1-206ENST00000444511 FKBP9P1Q75LS8 142 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms