RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 WIPI2Q9Y4P8 454 aa17.66■□□□□ 0.42
CPNE1-219ENST00000440240 A0A0G2JMP0 313 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 A0A0X1KG70 313 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 BBIP1A8MTZ0 92 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 PLPP2O43688 288 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 MMP15P51511 669 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 PSG4Q00888 419 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 SLC25A47Q6Q0C1 308 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 USP43Q70EL4 1123 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 ZNF101Q8IZC7 436 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 SEMA6DQ8NFY4 1073 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 OR4M2Q8NGB6 313 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 MARS2Q96GW9 593 aaKnown RBP17.65■□□□□ 0.42
CPNE1-219ENST00000440240 TMEM120AQ9BXJ8 343 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 EGLN1Q9GZT9 426 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 VIPAS39Q9H9C1 493 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 G6PC2Q9NQR9 355 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 CYSLTR2Q9NS75 346 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 HIF3AQ9Y2N7 669 aa17.65■□□□□ 0.42
CPNE1-219ENST00000440240 LOC100509620A0A075B734 347 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 J3QLI3 93 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 FXYD1O00168 92 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 MRASO14807 208 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 KDELR2P33947 212 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 WNT5AP41221 380 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 RPL27P61353 136 aaKnown RBP17.64■□□□□ 0.41
CPNE1-219ENST00000440240 PCBD1P61457 104 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 GLO1Q04760 184 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 FMODQ06828 376 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 SLC3A1Q07837 685 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 MAPRE2Q15555 327 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 CYBRD1Q53TN4 286 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 MBNL2Q5VZF2 373 aaKnown RBP17.64■□□□□ 0.41
CPNE1-219ENST00000440240 THSD4Q6ZMP0 1018 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 PCYOX1LQ8NBM8 494 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 AKR7LQ8NHP1 331 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 KLF14Q8TD94 323 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-219ENST00000440240 CCL17Q92583 94 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 BPIFA2Q96DR5 249 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 JMJD8Q96S16 334 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 GID8Q9NWU2 228 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 CGGBP1Q9UFW8 167 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-219ENST00000440240 TIMM10BQ9Y5J6 103 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 TENM1Q9UKZ4 2725 aa17.64■□□□□ 0.41
CPNE1-219ENST00000440240 WNK2Q9Y3S1 2297 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 IGKV1D-43A0A0B4J1Z2 117 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 SPRY3O43610 288 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 DEAF1O75398 565 aaPredicted RBP17.63■□□□□ 0.41
CPNE1-219ENST00000440240 IGHV1-46P01743 117 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 IGHV2-5P01817 119 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 CST2P09228 141 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 EPHA1P21709 976 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 GATA3P23771 443 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 ERVK-25P63136 954 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 SELENOWP63302 87 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 ANKDD1AQ495B1 522 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 SPATA46Q5T0L3 261 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 FAM205BPQ63HN1 556 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 C1orf229Q6ZS94 237 aaPredicted RBP17.63■□□□□ 0.41
CPNE1-219ENST00000440240 SLC25A40Q8TBP6 338 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 GTF3AQ92664 365 aaKnown RBP17.63■□□□□ 0.41
CPNE1-219ENST00000440240 TPD52L3Q96J77 140 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 DIRC2Q96SL1 478 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 OR2H1Q9GZK4 316 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 OR2J1Q9GZK6 312 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 ZDHHC8Q9ULC8 765 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 CACNG2Q9Y698 323 aa17.63■□□□□ 0.41
CPNE1-219ENST00000440240 H3BSA7 217 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 ICMTO60725 284 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 AVPP01185 164 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 IGHMP01871 453 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 TROVE2P10155 538 aaKnown RBP eCLIP17.62■□□□□ 0.41
CPNE1-219ENST00000440240 IFI30P13284 250 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 LAP3P28838 519 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 MPV17P39210 176 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 HILS1P60008 231 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 CTXN1P60606 82 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 KLF10Q13118 480 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 TOP3AQ13472 1001 aaPredicted RBP17.62■□□□□ 0.41
CPNE1-219ENST00000440240 LRRC23Q53EV4 343 aaPredicted RBP17.62■□□□□ 0.41
CPNE1-219ENST00000440240 DCAF12L2Q5VW00 463 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 ARL9Q6T311 187 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 PEG10Q86TG7 708 aaKnown RBP17.62■□□□□ 0.41
CPNE1-219ENST00000440240 TREML1Q86YW5 311 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 IPCEF1Q8WWN9 437 aaPredicted RBP17.62■□□□□ 0.41
CPNE1-219ENST00000440240 LZICQ8WZA0 190 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 PRRC1Q96M27 445 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 ELOVL3Q9HB03 270 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 KLHL21Q9UJP4 597 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 A4GNTQ9UNA3 340 aa17.62■□□□□ 0.41
CPNE1-219ENST00000440240 LOC105371242A0A075B767 164 aa17.61■□□□□ 0.41
CPNE1-219ENST00000440240 LOC100653049A0A140TA62 436 aa17.61■□□□□ 0.41
CPNE1-219ENST00000440240 A6NIZ1 184 aa17.61■□□□□ 0.41
CPNE1-219ENST00000440240 TRIM77I1YAP6 450 aa17.61■□□□□ 0.41
CPNE1-219ENST00000440240 KRT34O76011 436 aa17.61■□□□□ 0.41
CPNE1-219ENST00000440240 ADH4P08319 380 aa17.61■□□□□ 0.41
CPNE1-219ENST00000440240 MAKP20794 623 aa17.61■□□□□ 0.41
CPNE1-219ENST00000440240 CFPP27918 469 aa17.61■□□□□ 0.41
CPNE1-219ENST00000440240 ARHGDIAP52565 204 aa17.61■□□□□ 0.41
CPNE1-219ENST00000440240 ARFIP2P53365 341 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms