RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ACAA2P42765 397 aaKnown RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 NOVA1P51513 510 aaKnown RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 SSR4P51571 173 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 P2RX1P51575 399 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF41P51814 821 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 MLLT10P55197 1068 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 SH3BGRP55822 239 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 FBXW4P57775 412 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 CXCR4P61073 352 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 ISL1P61371 349 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 RPS18P62269 152 aaKnown RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 CSNK2BP67870 215 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF117Q03924 483 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 PRKCDQ05655 676 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 C17orf67Q0P5P2 114 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 SKP2Q13309 424 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 GINS1Q14691 196 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 QPRTQ15274 297 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 SNAPC1Q16533 368 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMEM44Q2T9K0 475 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 PGGHGQ32M88 737 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 NADK2Q4G0N4 442 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 KLHL26Q53HC5 615 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 CLEC12AQ5QGZ9 265 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC30A6Q6NXT4 461 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 OPN5Q6U736 354 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 UNQ6126/PRO20091Q6UXV3 157 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 WDR88Q6ZMY6 472 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 KCTD8Q6ZWB6 473 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 MOB3CQ70IA8 216 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 NDUFAF7Q7L592 441 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 PRSS45Q7RTY3 260 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 NUP54Q7Z3B4 507 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 NANOGNBQ7Z5D8 188 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZER1Q7Z7L7 766 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 GLRX5Q86SX6 157 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 MARCH3Q86UD3 253 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 SATL1Q86VE3 508 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 DND1Q8IYX4 353 aaKnown RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC43A2Q8N370 569 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMEM156Q8N614 296 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 CLDN22Q8N7P3 220 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 TCEANCQ8N8B7 351 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 LSMEM1Q8N8F7 131 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF441Q8N8Z8 693 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 POGLUT1Q8NBL1 392 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 APCDD1LQ8NCL9 501 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 FAM71CQ8NEG0 241 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 NFAM1Q8NET5 270 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR2T33Q8NG76 320 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR4K17Q8NGC6 315 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR8J1Q8NGP2 316 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR13C2Q8NGS9 318 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 M1APQ8TC57 530 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 APH1BQ8WW43 257 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMEM234Q8WY98 164 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 FCGR1BQ92637 280 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 KIAA1143Q96AT1 154 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 BPIFA2Q96DR5 249 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 SPACA9Q96E40 222 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 DTNBP1Q96EV8 351 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZC3HAV1LQ96H79 300 aaKnown RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 SAMD8Q96LT4 415 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 IL4I1Q96RQ9 567 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 RASL10BQ96S79 203 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 PRSS27Q9BQR3 290 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 COPS4Q9BT78 406 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 RSPO3Q9BXY4 272 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR52D1Q9H346 318 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 C12orf10Q9HB07 376 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF160Q9HCG1 818 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 MMP25Q9NPA2 562 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 NOX4Q9NPH5 578 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 CYSLTR2Q9NS75 346 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 TAS2R10Q9NYW0 307 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 DNAJC27Q9NZQ0 273 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 ABI3Q9P2A4 366 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 AASSQ9UDR5 926 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 WARS2Q9UGM6 360 aaKnown RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 NDRG3Q9UGV2 375 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 FBXL4Q9UKA2 621 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 PPIEQ9UNP9 301 aaKnown RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 BAIAP2Q9UQB8 552 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 FARSAQ9Y285 508 aaKnown RBP3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 SPTBP11277 2137 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 SDK2Q58EX2 2172 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 PTPRBP23467 1997 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 KIAA1549Q9HCM3 1950 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 ASXL3Q9C0F0 2248 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 PRUNE2Q8WUY3 3088 aa3.38□□□□□ -1.87
HMGB3P20-201ENST00000417997 TRAV27A0A087WT01 109 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 A0A087WUJ7 227 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMED7-TICAM2A0A0A6YYA0 188 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 HTR3EA5X5Y0 456 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 EFCAB10A6NFE3 127 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 ANKUB1A6NFN9 424 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 RIIAD1A6NNX1 92 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF99A8MXY4 864 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 B9A039 149 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 NPIPB11E5RHQ5 1161 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms