RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TGFBR2P37173 567 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 LIPAP38571 399 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 WNT4P56705 351 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 LSM6P62312 80 aaKnown RBP12.1□□□□□ -0.47
VAPB-202ENST00000395802 EGR3Q06889 387 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 SPHARQ15513 63 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 TIGD6Q17RP2 521 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 KCTD18Q6PI47 426 aaPredicted RBP12.1□□□□□ -0.47
VAPB-202ENST00000395802 FGD2Q7Z6J4 655 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 ANKRD13BQ86YJ7 626 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 ZNRF4Q8WWF5 429 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 WACQ9BTA9 647 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 ALG8Q9BVK2 526 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 CLEC4AQ9UMR7 237 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 PKD1L2Q7Z442 2459 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 SPENQ96T58 3664 aaKnown RBP12.09□□□□□ -0.47
VAPB-202ENST00000395802 A0A1W2PQL4 384 aaPredicted RBP12.09□□□□□ -0.47
VAPB-202ENST00000395802 TVP23AA6NH52 213 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 RPL36A-HNRNPH2H7BZ11 118 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 SELENOFO60613 162 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 WISP2O76076 250 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 GABARAPO95166 117 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 FARS2O95363 451 aaKnown RBP12.09□□□□□ -0.47
VAPB-202ENST00000395802 GAAP10253 952 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 MSR1P21757 451 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 DBPQ10586 325 aaPredicted RBP12.09□□□□□ -0.47
VAPB-202ENST00000395802 MRPL28Q13084 256 aaKnown RBP12.09□□□□□ -0.47
VAPB-202ENST00000395802 KCNMB1Q16558 191 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 RPTNQ6XPR3 784 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 LHFPL3Q86UP9 236 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 SYS1Q8N2H4 156 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 UBE2J2Q8N2K1 259 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 OR6K3Q8NGY3 331 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 OR2AJ1Q8NGZ0 328 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 OTOSQ8NHW6 89 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 TTYH2Q9BSA4 534 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 CXorf56Q9H5V9 222 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 ZNF835Q9Y2P0 537 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 POLR1DQ9Y2S0 133 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 SVILO95425 2214 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 HSPB2A8KAH6 182 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 UPK3AO75631 287 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 ATE1O95260 518 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 MT-ND5P03915 603 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 SPARCP09486 303 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 LIMS3P0CW19 117 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 LIMS4P0CW20 117 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 OR3A2P47893 321 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 ETV1P50549 477 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 SH3BGRP55822 239 aaPredicted RBP12.09□□□□□ -0.47
VAPB-202ENST00000395802 MRPS34P82930 218 aaKnown RBP12.09□□□□□ -0.47
VAPB-202ENST00000395802 LY6DQ14210 128 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 HSPB2Q16082 182 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 CTF1Q16619 201 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 PCK2Q16822 640 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 FBXW9Q5XUX1 488 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 PLEKHG7Q6ZR37 379 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 DPY19L4Q7Z388 723 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 FAM220AQ7Z4H9 259 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 P2RY8Q86VZ1 359 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 CDC20BQ86Y33 519 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 WDFY1Q8IWB7 410 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 ST6GALNAC3Q8NDV1 305 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 TSC22D3Q99576 134 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 TBX5Q99593 518 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 MROQ9BYG7 248 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 KCNN2Q9H2S1 579 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 SIAEQ9HAT2 523 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 POLE4Q9NR33 117 aa12.09□□□□□ -0.47
VAPB-202ENST00000395802 MRPL22Q9NWU5 206 aaKnown RBP12.09□□□□□ -0.47
VAPB-202ENST00000395802 GTF3C1Q12789 2109 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 IGKV1D-43A0A0B4J1Z2 117 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 NOL3O60936 208 aaKnown RBP12.08□□□□□ -0.48
VAPB-202ENST00000395802 SULT1C4O75897 302 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 TFP02787 698 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 KRT8P05787 483 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 ALOX5APP20292 161 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 NTF4P34130 210 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 TAS2R43P59537 309 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 ROR2Q01974 943 aaKnown RBP12.08□□□□□ -0.48
VAPB-202ENST00000395802 BDH1Q02338 343 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 TGFBR3Q03167 851 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 ST3GAL2Q16842 350 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 TSPO2Q5TGU0 170 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 PLXDC2Q6UX71 529 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 FOXL2NBQ6ZUU3 175 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 RHOUQ7L0Q8 258 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 CNEP1R1Q8N9A8 125 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 C9orf106Q8NAJ2 232 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 C11orf40Q8WZ69 217 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 ALKBH3Q96Q83 286 aaPredicted RBP12.08□□□□□ -0.48
VAPB-202ENST00000395802 MGLLQ99685 303 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 FOXB1Q99853 325 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 BCL7BQ9BQE9 202 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 ZNF649Q9BS31 505 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 GPR35Q9HC97 309 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 ISYNA1Q9NPH2 558 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 TRIM36Q9NQ86 728 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 MALT1Q9UDY8 824 aa12.08□□□□□ -0.48
VAPB-202ENST00000395802 HSMCR30P0CW71 290 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms