RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 RPL27P61353 136 aaKnown RBP5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 CYLC2Q14093 348 aaPredicted RBP5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 DUSP7Q16829 419 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 LRRN1Q6UXK5 716 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 HIST3H2AQ7L7L0 130 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 NANOGNBQ7Z5D8 188 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 ARPINQ7Z6K5 226 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 HDAC2Q92769 488 aaKnown RBP5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 HIST1H2ACQ93077 130 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 HAVCR1Q96D42 359 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 THOC1Q96FV9 657 aaKnown RBP5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 WFDC6Q9BQY6 131 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 CCDC134Q9H6E4 229 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 NOX4Q9NPH5 578 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 MED29Q9NX70 200 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 EIF3KQ9UBQ5 218 aaKnown RBP5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 TMEM5Q9Y2B1 443 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 AKAP6Q13023 2319 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 HMGB1P1B2RPK0 211 aaPredicted RBP5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 FXYD1O00168 92 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 TNFRSF13BO14836 293 aaPredicted RBP5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 PRSS23O95084 383 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 OR6A2O95222 327 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 ADORA3P0DMS8 318 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 RAC2P15153 192 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 FPR2P25090 351 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 STOMP27105 288 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 ALDH3B1P43353 468 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 NPY4RP50391 375 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 ZNF81P51508 661 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 RAD23AP54725 363 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 CLRN1P58418 232 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 MAPRE2Q15555 327 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 HFEQ30201 348 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 AWAT1Q58HT5 328 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 GKAP1Q5VSY0 366 aaPredicted RBP5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 SLC16A14Q7RTX9 510 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 FAM122BQ7Z309 247 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 HMGN2P46Q86SG4 172 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 TSPYL5Q86VY4 417 aaPredicted RBP5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 PAQR4Q8N4S7 273 aaPredicted RBP5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 ATP6V1G3Q96LB4 118 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 PPP1R36Q96LQ0 422 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 FUZQ9BT04 418 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 CCNB1IP1Q9NPC3 277 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 TRIM36Q9NQ86 728 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 SLC7A7Q9UM01 511 aa5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 NOP16Q9Y3C1 178 aaKnown RBP5.27□□□□□ -1.57
SMARCAD1-203ENST00000394961 NDUFAB1O14561 156 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 SELEP16581 610 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 NME5P56597 212 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 SPATS1Q496A3 300 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 C6orf10Q5SRN2 563 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 GPR139Q6DWJ6 353 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 ALKBH2Q6NS38 261 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 ZNF774Q6NX45 483 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 DEFB108BQ8NET1 73 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 TMEM239Q8WW34 195 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 A4GNTQ9UNA3 340 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 CUBNO60494 3623 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 IQCF6A8MYZ5 107 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 TNFRSF1AP19438 455 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 CD200P41217 278 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 MAGEB1P43366 347 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 SLC6A9P48067 706 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 PSG4Q00888 419 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 RUNX1T1Q06455 604 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 ST3GAL3Q11203 375 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 MTX3Q5HYI7 312 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 NXNQ6DKJ4 435 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 ADCK1Q86TW2 530 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 KLBQ86Z14 1044 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 MS4A3Q96HJ5 214 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 SYT3Q9BQG1 590 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 SAP30LQ9HAJ7 183 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 POLE4Q9NR33 117 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 SLAMF8Q9P0V8 285 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 MED31Q9Y3C7 131 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 POMT1Q9Y6A1 747 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 MXRA5Q9NR99 2828 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 LOC100509620A0A075B734 347 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 TEX13CA0A0J9YWL9 993 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 A0A1W2PPW3 197 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 SURF4O15260 269 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 RNF13O43567 381 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 EDF1O60869 148 aaKnown RBP5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 MSR1P21757 451 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 MDH2P40926 338 aaKnown RBP5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 SEC24CP53992 1094 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 SCRN3Q0VDG4 424 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 AQP6Q13520 282 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 PABPC1L2AQ5JQF8 200 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 LDLRAD3Q86YD5 345 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 KDM8Q8N371 416 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 KLF14Q8TD94 323 aaPredicted RBP5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 PTP4A1Q93096 173 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 RASD2Q96D21 266 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 METTL17Q9H7H0 456 aaPredicted RBP5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 RIMS3Q9UJD0 308 aa5.26□□□□□ -1.57
SMARCAD1-203ENST00000394961 M0QX08 132 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms