RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SELENOFO60613 162 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 PMP2P02689 132 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 HPNP05981 417 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 SSX1Q16384 188 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 FAM74A1Q5RGS3 127 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 TMEFF1Q8IYR6 380 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 OR2L13Q8N349 312 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 OR4D10Q8NGI6 311 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 DCBLD2Q96PD2 775 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 LDAHQ9H6V9 325 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 AUNIPQ9H7T9 357 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 GCM1Q9NP62 436 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 SIRT5Q9NXA8 310 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 GAB2Q9UQC2 676 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 A0A0A6YYC8 382 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-203ENST00000391813 I3L1I5 382 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-203ENST00000391813 CD37P11049 281 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 ZNF385BQ569K4 471 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 COMMD1Q8N668 190 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 ZCCHC4Q9H5U6 513 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 TMEM231Q9H6L2 316 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 MMP17Q9ULZ9 603 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 FITM1A5D6W6 292 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 CSNK1A1P48729 337 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 MEOX2P50222 304 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 POU3F1Q03052 451 aaPredicted RBP18.04■□□□□ 0.48
SHANK1-203ENST00000391813 DOC2BQ14184 412 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 DEFB133Q30KQ1 61 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 DEFB110Q30KQ9 67 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 FAM209AQ5JX71 171 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 FCRL6Q6DN72 434 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 RNF165Q6ZSG1 346 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 EMC9Q9Y3B6 208 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 DCTN6O00399 190 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 MSR1P21757 451 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 ACHEP22303 614 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 PYCR3Q53H96 274 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 FAM111BQ6SJ93 734 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 MKXQ8IYA7 352 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 NLGN4YQ8NFZ3 816 aaPredicted RBP18.04■□□□□ 0.48
SHANK1-203ENST00000391813 OR2G3Q8NGZ4 309 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 STACQ99469 402 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 TNFSF12O43508 249 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 SIGLEC6O43699 453 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 SFTPDP35247 375 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 LINC00303Q3SY05 128 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 PPP1R1CQ8WVI7 109 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 ZC3HAV1LQ96H79 300 aaKnown RBP18.04■□□□□ 0.48
SHANK1-203ENST00000391813 BRWD3Q6RI45 1802 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 DCTDP32321 178 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 MELKQ14680 651 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 HLXQ14774 488 aaPredicted RBP18.04■□□□□ 0.48
SHANK1-203ENST00000391813 ELFN2Q5R3F8 820 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 GNPNAT1Q96EK6 184 aaPredicted RBP18.04■□□□□ 0.48
SHANK1-203ENST00000391813 SERTAD4Q9NUC0 356 aa18.04■□□□□ 0.48
SHANK1-203ENST00000391813 LOC102725191A0A1B0GVB3 256 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 TXNDC12O95881 172 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 SLC36A2Q495M3 483 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 RFLNAQ6ZTI6 216 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 ZNF595Q8IYB9 648 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 HMGCLL1Q8TB92 370 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 SFT2D1Q8WV19 159 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 ATOH1Q92858 354 aaPredicted RBP18.03■□□□□ 0.48
SHANK1-203ENST00000391813 HINT2Q9BX68 163 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 CDCP1Q9H5V8 836 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 OPA3Q9H6K4 179 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 ARID1BQ8NFD5 2236 aaPredicted RBP18.03■□□□□ 0.48
SHANK1-203ENST00000391813 TRAV36DV7A0A075B6V5 113 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 A6NLC8 198 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 H7C1C5 153 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 CTSLP07711 333 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 LCN6P62502 163 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 CTBSQ01459 385 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 PHYHIPLQ96FC7 376 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 Q96M85 177 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 FOXN4Q96NZ1 517 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 TMPRSS5Q9H3S3 457 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 MDFIC2A0A1B0GVS7 189 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 NDUFB6O95139 128 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 DPP4P27487 766 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 OR1D4P47884 311 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 CASP6P55212 293 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 UBE2MP61081 183 aaKnown RBP18.03■□□□□ 0.48
SHANK1-203ENST00000391813 ADIRFQ15847 76 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 BORCS7Q96B45 105 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 SEH1LQ96EE3 360 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 SLC46A1Q96NT5 459 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 LYSMD1Q96S90 227 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 ADAM19Q9H013 955 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 ZNF724A8MTY0 619 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 CALCRP30988 508 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 RAB38P57729 211 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 OR51A4Q8NGJ6 313 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 INSM2Q96T92 566 aaPredicted RBP18.03■□□□□ 0.48
SHANK1-203ENST00000391813 TXN2Q99757 166 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 NXF5Q9H1B4 397 aaKnown RBP18.03■□□□□ 0.48
SHANK1-203ENST00000391813 MYO7AQ13402 2215 aa18.03■□□□□ 0.48
SHANK1-203ENST00000391813 H7BYZ3 331 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 CD3DP04234 171 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms