RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 DHHO43323 396 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 MRPL33O75394 65 aaKnown RBP16.44■□□□□ 0.22
CLN3-206ENST00000360019 YES1P07947 543 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 ZNF823P16415 610 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 TPBGQ13641 420 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 CTF1Q16619 201 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 CNPY1Q3B7I2 92 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 TEX30Q5JUR7 227 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 LINGO2Q7L985 606 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 RAB2BQ8WUD1 216 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 THEM6Q8WUY1 208 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 RPL3LQ92901 407 aaKnown RBP16.44■□□□□ 0.22
CLN3-206ENST00000360019 PELI1Q96FA3 418 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 ALKBH3Q96Q83 286 aaPredicted RBP16.44■□□□□ 0.22
CLN3-206ENST00000360019 PRORYQ9H606 182 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 EMC7Q9NPA0 242 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 ACOXLQ9NUZ1 547 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 GRIP1Q9Y3R0 1128 aa16.44■□□□□ 0.22
CLN3-206ENST00000360019 SIRT4Q9Y6E7 314 aaPredicted RBP16.44■□□□□ 0.22
CLN3-206ENST00000360019 LRRTM2O43300 516 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 FCGR2AP12318 317 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 GADD45AP24522 165 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 BDH1Q02338 343 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 FOXL2NBQ6ZUU3 175 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 LINC00346Q8IVM7 164 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 MCEMP1Q8IX19 187 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 CISD2Q8N5K1 135 aaKnown RBP16.43■□□□□ 0.22
CLN3-206ENST00000360019 KDF1Q8NAX2 398 aaPredicted RBP16.43■□□□□ 0.22
CLN3-206ENST00000360019 TRIB1Q96RU8 372 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 TRIM36Q9NQ86 728 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 POLE4Q9NR33 117 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 NDUFB11Q9NX14 153 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 MRM2Q9UI43 246 aaKnown RBP16.43■□□□□ 0.22
CLN3-206ENST00000360019 GNG8Q9UK08 70 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 SPTA1P02549 2419 aa16.43■□□□□ 0.22
CLN3-206ENST00000360019 TMEM8BA6NDV4 472 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 ABHD16AO95870 558 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 WNT11O96014 354 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 TSPO2Q5TGU0 170 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 SLC18B1Q6NT16 456 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 RPTNQ6XPR3 784 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 PLEKHG7Q6ZR37 379 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 GPR137CQ8N3F9 429 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 OR10H5Q8NGA6 315 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 UFD1Q92890 307 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 ABHD6Q9BV23 337 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 RBM24Q9BX46 236 aaKnown RBP16.42■□□□□ 0.22
CLN3-206ENST00000360019 OR51E2Q9H255 320 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 CRLF2Q9HC73 371 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 PARPBPQ9NWS1 579 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 CYB5R1Q9UHQ9 305 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 PKD1L2Q7Z442 2459 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 MED12LQ86YW9 2145 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 FREM1Q5H8C1 2179 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 PHYHO14832 338 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 IGHV3-9P01782 118 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 OR8G3PP0DMU2 310 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 CELP19835 753 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 EGR3Q06889 387 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 AQP6Q13520 282 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 EIF2B1Q14232 305 aaKnown RBP16.42■□□□□ 0.22
CLN3-206ENST00000360019 KCNMB1Q16558 191 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 ACSF3Q4G176 576 aaPredicted RBP16.42■□□□□ 0.22
CLN3-206ENST00000360019 KRTCAP3Q53RY4 240 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 RIPPLY2Q5TAB7 128 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 CORO6Q6QEF8 472 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 NUFIP2Q7Z417 695 aaKnown RBP16.42■□□□□ 0.22
CLN3-206ENST00000360019 P4HA3Q7Z4N8 544 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 ZNF454Q8N9F8 522 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 ST7LQ8TDW4 575 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 NABP1Q96AH0 204 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 MRPL48Q96GC5 212 aaKnown RBP16.42■□□□□ 0.22
CLN3-206ENST00000360019 SLCO5A1Q9H2Y9 848 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 GP6Q9HCN6 339 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 SLCO1C1Q9NYB5 712 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 GTF3C1Q12789 2109 aa16.42■□□□□ 0.22
CLN3-206ENST00000360019 TPRP12270 2363 aaKnown RBP16.41■□□□□ 0.22
CLN3-206ENST00000360019 ACACBO00763 2458 aa16.41■□□□□ 0.22
CLN3-206ENST00000360019 ATRXP46100 2492 aa16.41■□□□□ 0.22
CLN3-206ENST00000360019 NOL3O60936 208 aaKnown RBP16.41■□□□□ 0.22
CLN3-206ENST00000360019 ATE1O95260 518 aa16.41■□□□□ 0.22
CLN3-206ENST00000360019 AGTR1P30556 359 aa16.41■□□□□ 0.22
CLN3-206ENST00000360019 CAPZA2P47755 286 aa16.41■□□□□ 0.22
CLN3-206ENST00000360019 TDGF1P3P51864 188 aa16.41■□□□□ 0.22
CLN3-206ENST00000360019 LSM3P62310 102 aaKnown RBP16.41■□□□□ 0.22
CLN3-206ENST00000360019 DCXRQ7Z4W1 244 aa16.41■□□□□ 0.22
CLN3-206ENST00000360019 RNF166Q96A37 237 aaPredicted RBP16.41■□□□□ 0.22
CLN3-206ENST00000360019 OR8B4Q96RC9 309 aa16.41■□□□□ 0.22
CLN3-206ENST00000360019 TTYH2Q9BSA4 534 aa16.41■□□□□ 0.22
CLN3-206ENST00000360019 SF3B6Q9Y3B4 125 aaKnown RBP16.41■□□□□ 0.22
CLN3-206ENST00000360019 LHFPL6Q9Y693 200 aa16.41■□□□□ 0.22
CLN3-206ENST00000360019 METTL15A6NJ78 407 aa16.4■□□□□ 0.22
CLN3-206ENST00000360019 AHRRA9YTQ3 701 aa16.4■□□□□ 0.22
CLN3-206ENST00000360019 AIREO43918 545 aa16.4■□□□□ 0.22
CLN3-206ENST00000360019 SULT1C4O75897 302 aa16.4■□□□□ 0.22
CLN3-206ENST00000360019 SOWAHCQ53LP3 525 aaPredicted RBP16.4■□□□□ 0.22
CLN3-206ENST00000360019 ZNF585AQ6P3V2 769 aa16.4■□□□□ 0.22
CLN3-206ENST00000360019 LRRN1Q6UXK5 716 aa16.4■□□□□ 0.22
CLN3-206ENST00000360019 OR52N5Q8NH56 324 aa16.4■□□□□ 0.22
CLN3-206ENST00000360019 ASB17Q8WXJ9 295 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms