RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 SRA1Q9HD15 236 aaKnown RBP6.31□□□□□ -1.4
VPS8-201ENST00000287546 GFOD1Q9NXC2 390 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 MUTYHQ9UIF7 546 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 GPR55Q9Y2T6 319 aaPredicted RBP6.31□□□□□ -1.4
VPS8-201ENST00000287546 CSN2P05814 226 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 APEHP13798 732 aaKnown RBP6.31□□□□□ -1.4
VPS8-201ENST00000287546 TBXA2RP21731 343 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 RRAS2P62070 204 aaPredicted RBP6.31□□□□□ -1.4
VPS8-201ENST00000287546 DUSP2Q05923 314 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 ZFP69Q49AA0 526 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 CCDC58Q4VC31 144 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 DHRS13Q6UX07 377 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 CCBE1Q6UXH8 406 aaPredicted RBP6.31□□□□□ -1.4
VPS8-201ENST00000287546 LRRC28Q86X40 367 aaPredicted RBP6.31□□□□□ -1.4
VPS8-201ENST00000287546 CCDC71Q8IV32 467 aaPredicted RBP6.31□□□□□ -1.4
VPS8-201ENST00000287546 SAMD12Q8N8I0 201 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 DTWD2Q8NBA8 298 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 LSM14AQ8ND56 463 aaKnown RBP6.31□□□□□ -1.4
VPS8-201ENST00000287546 ZG16BQ96DA0 208 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 S100A16Q96FQ6 103 aaKnown RBP6.31□□□□□ -1.4
VPS8-201ENST00000287546 PLA2G12AQ9BZM1 189 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 LRRN3Q9H3W5 708 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 UBTD1Q9HAC8 227 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 DNAJB12Q9NXW2 375 aaKnown RBP6.31□□□□□ -1.4
VPS8-201ENST00000287546 B3GAT1Q9P2W7 334 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 ZNF222Q9UK12 451 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 SIGLEC7Q9Y286 467 aa6.31□□□□□ -1.4
VPS8-201ENST00000287546 CDX4O14627 284 aaPredicted RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 PPIHO43447 177 aaKnown RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 GPX5O75715 221 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 PSKH1P11801 424 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 FGF9P31371 208 aaPredicted RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 ACVR1BP36896 505 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 MAP2K3P46734 347 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 LSSP48449 732 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 EMDP50402 254 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 RPS25P62851 125 aaKnown RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 PLAURQ03405 335 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 GLO1Q04760 184 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 FUT5Q11128 374 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 SF3A2Q15428 464 aaKnown RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 PRAMEF17Q5VTA0 474 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 HBMQ6B0K9 141 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 PAPD4Q6PIY7 484 aaKnown RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 CMTM1Q8IZ96 169 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 D2HGDHQ8N465 521 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 TOMM5Q8N4H5 51 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 FRMD1Q8N878 549 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 DYNLRB2Q8TF09 96 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 ZNF845Q96IR2 970 aaPredicted RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 SLIRPQ9GZT3 109 aaKnown RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 NTNG1Q9Y2I2 539 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 C4orf51C9J302 202 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 GABARAPH6UMI1 98 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 ARPC3O15145 178 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 TGM6O95932 706 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 PNLIPP16233 465 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 MSR1P21757 451 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 EDDM3BP56851 147 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 AIMP2Q13155 320 aaKnown RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 SLC36A2Q495M3 483 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 AARDQ4LEZ3 155 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 FAM69AQ5T7M9 428 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 C9orf135Q5VTT2 229 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 SLC22A10Q63ZE4 541 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 GLT8D1Q68CQ7 371 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 C17orf107Q6ZR85 190 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 BCDIN3DQ7Z5W3 292 aaKnown RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 NOXA1Q86UR1 476 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 SERPINA12Q8IW75 414 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 MUC15Q8N387 334 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 ZNF418Q8TF45 676 aaPredicted RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 CHODLQ9H9P2 273 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 CALHM2Q9HA72 323 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 MAN2C1Q9NTJ4 1040 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 COPZ2Q9P299 210 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 GNG13Q9P2W3 67 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 DHDHQ9UQ10 334 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 EXOGQ9Y2C4 368 aaKnown RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 NPFFR2Q9Y5X5 522 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 A0A1W2PR77 199 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 DNASE2O00115 360 aaPredicted RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 SCAF4O95104 1147 aaKnown RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 CT62P0C5K7 136 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 PPP1CAP62136 330 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 PSG6Q00889 435 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 TRA2AQ13595 282 aaKnown RBP eCLIP6.3□□□□□ -1.4
VPS8-201ENST00000287546 AADACL4Q5VUY2 407 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 KIRREL2Q6UWL6 708 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 AAED1Q7RTV5 226 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 C1orf210Q8IVY1 113 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 OR4Q3Q8NH05 313 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 ST8SIA1Q92185 356 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 RAB1CQ92928 201 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 RSRP1Q9BUV0 290 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 ALG12Q9BV10 488 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 ESRP2Q9H6T0 727 aaKnown RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 RYDENQ9NUL5 291 aaKnown RBP6.3□□□□□ -1.4
VPS8-201ENST00000287546 LUZP4Q9P127 313 aa6.3□□□□□ -1.4
VPS8-201ENST00000287546 CNOT1A5YKK6 2376 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms