RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 IFNGR2P38484 337 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 SRSF4Q08170 494 aaKnown RBP14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 DRAM2Q6UX65 266 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 C1QL4Q86Z23 238 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 ROBO4Q8WZ75 1007 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 OR8D1Q8WZ84 308 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 DTD2Q96FN9 168 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 DPH1Q9BZG8 443 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 ZNF350Q9GZX5 532 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 ATG5Q9H1Y0 275 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 OR52D1Q9H346 318 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 PLA2G2EQ9NZK7 142 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 AMDHD2Q9Y303 409 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 V9GY05 133 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 LRRK1Q38SD2 2015 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 TBC1D3DA0A087WVF3 549 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 TBC1D3IA0A087WXS9 549 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 TBC1D3EA0A087X179 549 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 TBC1D3KA0A087X1G2 549 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 TEX13DA0A0J9YY54 714 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 TBC1D3FA6NER0 549 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 SEC14L6B5MCN3 397 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 TBC1D3LB9A6J9 549 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 H3BSH0 61 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 TBX6O95947 436 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 C5AR1P21730 350 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 NTSP30990 170 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 SNRPNP63162 240 aaKnown RBP14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 TBC1D3CQ6IPX1 549 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 THSD4Q6ZMP0 1018 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST2H3AQ71DI3 136 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 VRK2Q86Y07 508 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 TBC1D3Q8IZP1 549 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 ZNF664Q8N3J9 261 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 NTNG2Q96CW9 530 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 THOC3Q96J01 351 aaKnown RBP14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 SNHG12Q9BXW3 62 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 TWSG1Q9GZX9 223 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 SPACA1Q9HBV2 294 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 KRCC1Q9NPI7 259 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 DMRT3Q9NQL9 472 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 P2RX2Q9UBL9 471 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 CHRNA9Q9UGM1 479 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 FBXL21Q9UKT6 434 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 C5orf67F2Z3F1 127 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST1H2BKO60814 126 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST1H2BJP06899 126 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 DCNP07585 359 aaKnown RBP14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 CSF1P09603 554 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 RAB40ALP0C0E4 278 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST1H2BOP23527 126 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 EDNRAP25101 427 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST1H2BBP33778 126 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST1H2BDP58876 126 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 RPS23P62266 143 aaKnown RBP14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST1H2BCP62807 126 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 CNTN1Q12860 1018 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST2H2BEQ16778 126 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 MESTQ5EB52 335 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 STEAP1BQ6NZ63 245 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 MED27Q6P2C8 311 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 TAF8Q7Z7C8 310 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 TRAPPC5Q8IUR0 188 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 RAB40AQ8WXH6 277 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST1H2BHQ93079 126 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 MR1Q95460 341 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 YPEL4Q96NS1 127 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST1H2BNQ99877 126 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST1H2BMQ99879 126 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 NDUFAF3Q9BU61 184 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 RGCCQ9H4X1 137 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 KCNIP3Q9Y2W7 256 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 ADAM18Q9Y3Q7 739 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 KPTNQ9Y664 436 aa14.24□□□□□ -0.13
CTDSP1-201ENST00000273062 OGG1O15527 345 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 XRCC3O43542 346 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 CSN2P05814 226 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 OR8G3PP0DMU2 310 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 VAMP1P23763 118 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 IL2RGP31785 369 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 C9orf50Q5SZB4 431 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 ZNF585AQ6P3V2 769 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 CLEC1AQ8NC01 280 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 ADAMTS17Q8TE56 1095 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 FGF13Q92913 245 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 SLC25A36Q96CQ1 311 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 KCNE3Q9Y6H6 103 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 SYNDIG1LA6NDD5 238 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 H0YIZ8 118 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 MAN2B1O00754 1011 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 IL18BPO95998 194 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 TEAD1P28347 426 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 NAA10P41227 235 aaPredicted RBP14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 PRKAG1P54619 331 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 DVL1P1P54792 670 aaPredicted RBP14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 SIRPAP78324 504 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 AMZ1Q400G9 498 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 BTNL8Q6UX41 500 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 SLCO4C1Q6ZQN7 724 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms