RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 BSDC1Q9NW68 430 aaPredicted RBP24.35■■□□□ 1.49
PHGDH-210ENST00000641115 AKAP2Q9Y2D5 859 aa24.35■■□□□ 1.49
PHGDH-210ENST00000641115 ZNF609O15014 1411 aa24.35■■□□□ 1.49
PHGDH-210ENST00000641115 SALL3Q9BXA9 1300 aa24.35■■□□□ 1.49
PHGDH-210ENST00000641115 GRAPQ13588 217 aa24.35■■□□□ 1.49
PHGDH-210ENST00000641115 GRAPLQ8TC17 118 aaPredicted RBP24.35■■□□□ 1.49
PHGDH-210ENST00000641115 GPATCH3Q96I76 525 aa24.35■■□□□ 1.49
PHGDH-210ENST00000641115 PSDA5PKW4 1024 aaPredicted RBP24.34■■□□□ 1.49
PHGDH-210ENST00000641115 POLD1P28340 1107 aa24.33■■□□□ 1.49
PHGDH-210ENST00000641115 HOXA10P31260 410 aaPredicted RBP24.33■■□□□ 1.49
PHGDH-210ENST00000641115 PDE1AP54750 535 aa24.33■■□□□ 1.49
PHGDH-210ENST00000641115 PDE8BO95263 885 aa24.32■■□□□ 1.48
PHGDH-210ENST00000641115 CCDC8Q9H0W5 538 aaPredicted RBP24.32■■□□□ 1.48
PHGDH-210ENST00000641115 OSBPL3Q9H4L5 887 aa24.32■■□□□ 1.48
PHGDH-210ENST00000641115 AOX1Q06278 1338 aa24.32■■□□□ 1.48
PHGDH-210ENST00000641115 C10orf71Q711Q0 1435 aa24.32■■□□□ 1.48
PHGDH-210ENST00000641115 SRGNP10124 158 aa24.32■■□□□ 1.48
PHGDH-210ENST00000641115 VGLL2Q8N8G2 317 aa24.32■■□□□ 1.48
PHGDH-210ENST00000641115 CRAMP1Q96RY5 1269 aa24.32■■□□□ 1.48
PHGDH-210ENST00000641115 STAP2Q9UGK3 403 aa24.32■■□□□ 1.48
PHGDH-210ENST00000641115 ATF5Q9Y2D1 282 aaPredicted RBP24.32■■□□□ 1.48
PHGDH-210ENST00000641115 TTC41PQ6P2S7 1318 aa24.31■■□□□ 1.48
PHGDH-210ENST00000641115 A0A1B0GUL7 405 aa24.31■■□□□ 1.48
PHGDH-210ENST00000641115 NPR1P16066 1061 aa24.31■■□□□ 1.48
PHGDH-210ENST00000641115 CHRNDQ07001 517 aa24.31■■□□□ 1.48
PHGDH-210ENST00000641115 KIF13BQ9NQT8 1826 aa24.31■■□□□ 1.48
PHGDH-210ENST00000641115 ARAP2Q8WZ64 1704 aa24.31■■□□□ 1.48
PHGDH-210ENST00000641115 ATP2B3Q16720 1220 aa24.3■■□□□ 1.48
PHGDH-210ENST00000641115 NEUROD6Q96NK8 337 aa24.3■■□□□ 1.48
PHGDH-210ENST00000641115 CACNA1SQ13698 1873 aa24.3■■□□□ 1.48
PHGDH-210ENST00000641115 PUM3Q15397 648 aaKnown RBP24.29■■□□□ 1.48
PHGDH-210ENST00000641115 TTC22Q5TAA0 569 aa24.29■■□□□ 1.48
PHGDH-210ENST00000641115 MASTLQ96GX5 879 aa24.29■■□□□ 1.48
PHGDH-210ENST00000641115 ECHDC1Q9NTX5 307 aa24.29■■□□□ 1.48
PHGDH-210ENST00000641115 TLR7Q9NYK1 1049 aaKnown RBP24.29■■□□□ 1.48
PHGDH-210ENST00000641115 H0YIN7 160 aa24.28■■□□□ 1.48
PHGDH-210ENST00000641115 BMP2KLQ5H9B9 411 aa24.28■■□□□ 1.48
PHGDH-210ENST00000641115 C2CD5Q86YS7 1000 aa24.28■■□□□ 1.48
PHGDH-210ENST00000641115 HELBQ8NG08 1087 aaPredicted RBP24.28■■□□□ 1.48
PHGDH-210ENST00000641115 DBNLQ9UJU6 430 aaKnown RBP24.28■■□□□ 1.48
PHGDH-210ENST00000641115 MINPP1Q9UNW1 487 aa24.28■■□□□ 1.48
PHGDH-210ENST00000641115 DLEC1Q9Y238 1755 aa24.28■■□□□ 1.48
PHGDH-210ENST00000641115 ERC2O15083 957 aa24.28■■□□□ 1.48
PHGDH-210ENST00000641115 BBOX1O75936 387 aa24.28■■□□□ 1.48
PHGDH-210ENST00000641115 ALDH1B1P30837 517 aa24.28■■□□□ 1.48
PHGDH-210ENST00000641115 TIMM10P62072 90 aa24.28■■□□□ 1.48
PHGDH-210ENST00000641115 TSHZ3Q63HK5 1081 aa24.28■■□□□ 1.48
PHGDH-210ENST00000641115 DBNDD2Q9BQY9 259 aa24.28■■□□□ 1.48
PHGDH-210ENST00000641115 TAF5LO75529 589 aa24.27■■□□□ 1.48
PHGDH-210ENST00000641115 TMC4Q7Z404 712 aa24.27■■□□□ 1.48
PHGDH-210ENST00000641115 ANKRD2Q9GZV1 360 aa24.27■■□□□ 1.48
PHGDH-210ENST00000641115 LPIN2Q92539 896 aa24.26■■□□□ 1.47
PHGDH-210ENST00000641115 LRRC37AA6NMS7 1700 aa24.26■■□□□ 1.47
PHGDH-210ENST00000641115 GLRX3O76003 335 aaKnown RBP24.25■■□□□ 1.47
PHGDH-210ENST00000641115 SLC5A1P13866 664 aa24.25■■□□□ 1.47
PHGDH-210ENST00000641115 STYK1Q6J9G0 422 aa24.25■■□□□ 1.47
PHGDH-210ENST00000641115 GSPT1P15170 499 aaKnown RBP24.24■■□□□ 1.47
PHGDH-210ENST00000641115 GORABQ5T7V8 394 aa24.24■■□□□ 1.47
PHGDH-210ENST00000641115 PI4K2BQ8TCG2 481 aa24.24■■□□□ 1.47
PHGDH-210ENST00000641115 ZNF622Q969S3 477 aaKnown RBP eCLIP24.24■■□□□ 1.472e-6■■■□□ 15.2
PHGDH-210ENST00000641115 AK9Q5TCS8 1911 aa24.24■■□□□ 1.47
PHGDH-210ENST00000641115 PPEF1O14829 653 aaPredicted RBP24.24■■□□□ 1.47
PHGDH-210ENST00000641115 FGFR2P21802 821 aa24.24■■□□□ 1.47
PHGDH-210ENST00000641115 XAGE2Q96GT9 111 aa24.24■■□□□ 1.47
PHGDH-210ENST00000641115 IFIT1P09914 478 aaKnown RBP24.23■■□□□ 1.47
PHGDH-210ENST00000641115 SOCS7O14512 581 aa24.22■■□□□ 1.47
PHGDH-210ENST00000641115 CHRNA5P30532 468 aa24.22■■□□□ 1.47
PHGDH-210ENST00000641115 ADORA1P30542 326 aa24.21■■□□□ 1.47
PHGDH-210ENST00000641115 KCNJ4P48050 445 aa24.21■■□□□ 1.47
PHGDH-210ENST00000641115 UBE4AQ14139 1066 aa24.21■■□□□ 1.47
PHGDH-210ENST00000641115 CCDC158Q5M9N0 1113 aa24.21■■□□□ 1.47
PHGDH-210ENST00000641115 CNKSR1Q969H4 720 aa24.21■■□□□ 1.47
PHGDH-210ENST00000641115 SGIP1Q9BQI5 828 aa24.21■■□□□ 1.47
PHGDH-210ENST00000641115 ANKIB1Q9P2G1 1089 aa24.21■■□□□ 1.47
PHGDH-210ENST00000641115 XDHP47989 1333 aa24.2■■□□□ 1.46
PHGDH-210ENST00000641115 ATP5JP18859 108 aa24.2■■□□□ 1.46
PHGDH-210ENST00000641115 TMX4Q9H1E5 349 aaPredicted RBP24.2■■□□□ 1.46
PHGDH-210ENST00000641115 TRIM6-TRIM34B2RNG4 842 aa24.19■■□□□ 1.46
PHGDH-210ENST00000641115 TTC39AQ5SRH9 613 aa24.19■■□□□ 1.46
PHGDH-210ENST00000641115 SP8Q8IXZ3 490 aa24.19■■□□□ 1.46
PHGDH-210ENST00000641115 ATP6V0A2Q9Y487 856 aa24.19■■□□□ 1.46
PHGDH-210ENST00000641115 KIAA1551Q9HCM1 1747 aa24.18■■□□□ 1.46
PHGDH-210ENST00000641115 SNAP23O00161 211 aa24.18■■□□□ 1.46
PHGDH-210ENST00000641115 SLX4Q8IY92 1834 aa24.18■■□□□ 1.46
PHGDH-210ENST00000641115 ZNF804BA4D1E1 1349 aa24.18■■□□□ 1.46
PHGDH-210ENST00000641115 SDSP20132 328 aa24.17■■□□□ 1.46
PHGDH-210ENST00000641115 PTGER2P43116 358 aa24.17■■□□□ 1.46
PHGDH-210ENST00000641115 PRPF40BQ6NWY9 871 aaKnown RBP24.17■■□□□ 1.46
PHGDH-210ENST00000641115 BOLA2Q9H3K6 86 aa24.17■■□□□ 1.46
PHGDH-210ENST00000641115 SPON1Q9HCB6 807 aa24.17■■□□□ 1.46
PHGDH-210ENST00000641115 LEMD3Q9Y2U8 911 aa24.17■■□□□ 1.46
PHGDH-210ENST00000641115 LTBP1Q14766 1721 aa24.17■■□□□ 1.46
PHGDH-210ENST00000641115 TGFB2P61812 414 aa24.17■■□□□ 1.46
PHGDH-210ENST00000641115 CNTROBQ8N137 903 aa24.17■■□□□ 1.46
PHGDH-210ENST00000641115 RILPL2Q969X0 211 aa24.17■■□□□ 1.46
PHGDH-210ENST00000641115 NSFL1CQ9UNZ2 370 aaKnown RBP24.17■■□□□ 1.46
PHGDH-210ENST00000641115 GPSM2P81274 684 aa24.16■■□□□ 1.46
PHGDH-210ENST00000641115 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.16■■□□□ 1.46
PHGDH-210ENST00000641115 CCDC102BQ68D86 513 aa24.15■■□□□ 1.46
PHGDH-210ENST00000641115 PODXL2Q9NZ53 605 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms