RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 USP44Q9H0E7 712 aa17.95■□□□□ 0.46
SDHD-209ENST00000640554 DICER1Q9UPY3 1922 aaKnown RBP17.94■□□□□ 0.46
SDHD-209ENST00000640554 LEMD3Q9Y2U8 911 aa17.94■□□□□ 0.46
SDHD-209ENST00000640554 CHMP3Q9Y3E7 222 aa17.94■□□□□ 0.46
SDHD-209ENST00000640554 POTECB2RU33 542 aa17.93■□□□□ 0.46
SDHD-209ENST00000640554 UFL1O94874 794 aa17.93■□□□□ 0.46
SDHD-209ENST00000640554 SLC51AQ86UW1 340 aa17.93■□□□□ 0.46
SDHD-209ENST00000640554 ZNF541Q9H0D2 1346 aa17.93■□□□□ 0.46
SDHD-209ENST00000640554 G3V3G9 751 aa17.92■□□□□ 0.46
SDHD-209ENST00000640554 RABL6Q3YEC7 729 aaPredicted RBP17.92■□□□□ 0.46
SDHD-209ENST00000640554 TAF7LQ5H9L4 462 aa17.92■□□□□ 0.46
SDHD-209ENST00000640554 EPHA10Q5JZY3 1008 aa17.92■□□□□ 0.46
SDHD-209ENST00000640554 DCAF8Q5TAQ9 597 aa17.92■□□□□ 0.46
SDHD-209ENST00000640554 INTS3Q68E01 1043 aaKnown RBP17.92■□□□□ 0.46
SDHD-209ENST00000640554 ATF7IPQ6VMQ6 1270 aa17.92■□□□□ 0.46
SDHD-209ENST00000640554 PNMA8AQ86V59 439 aaPredicted RBP17.92■□□□□ 0.46
SDHD-209ENST00000640554 SMC1BQ8NDV3 1235 aa17.92■□□□□ 0.46
SDHD-209ENST00000640554 SUCLG2Q96I99 432 aa17.92■□□□□ 0.46
SDHD-209ENST00000640554 HACL1Q9UJ83 578 aa17.92■□□□□ 0.46
SDHD-209ENST00000640554 LMOD1P29536 600 aaPredicted RBP17.91■□□□□ 0.46
SDHD-209ENST00000640554 CXCL9Q07325 125 aa17.91■□□□□ 0.46
SDHD-209ENST00000640554 CIAPIN1Q6FI81 312 aa17.91■□□□□ 0.46
SDHD-209ENST00000640554 KAZALD1Q96I82 304 aa17.91■□□□□ 0.46
SDHD-209ENST00000640554 GJA3Q9Y6H8 435 aa17.91■□□□□ 0.46
SDHD-209ENST00000640554 LRRC37AA6NMS7 1700 aa17.91■□□□□ 0.46
SDHD-209ENST00000640554 TIAM2Q8IVF5 1701 aa17.91■□□□□ 0.46
SDHD-209ENST00000640554 CCDC88AQ3V6T2 1871 aa17.9■□□□□ 0.46
SDHD-209ENST00000640554 WDR90Q96KV7 1748 aa17.9■□□□□ 0.46
SDHD-209ENST00000640554 RIMBP2O15034 1052 aa17.9■□□□□ 0.46
SDHD-209ENST00000640554 BCAR3O75815 825 aa17.9■□□□□ 0.46
SDHD-209ENST00000640554 UBTFL1P0CB47 393 aaPredicted RBP17.9■□□□□ 0.46
SDHD-209ENST00000640554 ZKSCAN2Q63HK3 967 aa17.9■□□□□ 0.46
SDHD-209ENST00000640554 LDHAL6AQ6ZMR3 332 aa17.9■□□□□ 0.46
SDHD-209ENST00000640554 GNAI3P08754 354 aa17.89■□□□□ 0.45
SDHD-209ENST00000640554 PODNQ7Z5L7 613 aa17.89■□□□□ 0.45
SDHD-209ENST00000640554 FRAT1Q92837 279 aaPredicted RBP17.89■□□□□ 0.45
SDHD-209ENST00000640554 TAF1DQ9H5J8 278 aaPredicted RBP17.89■□□□□ 0.45
SDHD-209ENST00000640554 BICC1Q9H694 974 aaKnown RBP17.89■□□□□ 0.45
SDHD-209ENST00000640554 ECE2O60344 883 aa17.88■□□□□ 0.45
SDHD-209ENST00000640554 TRIM27P14373 513 aa17.88■□□□□ 0.45
SDHD-209ENST00000640554 CHRNDQ07001 517 aa17.88■□□□□ 0.45
SDHD-209ENST00000640554 CNNM1Q9NRU3 951 aa17.88■□□□□ 0.45
SDHD-209ENST00000640554 MED23Q9ULK4 1368 aa17.88■□□□□ 0.45
SDHD-209ENST00000640554 DUOX1Q9NRD9 1551 aa17.87■□□□□ 0.45
SDHD-209ENST00000640554 RPS12P25398 132 aaKnown RBP17.87■□□□□ 0.45
SDHD-209ENST00000640554 EPHX2P34913 555 aa17.87■□□□□ 0.45
SDHD-209ENST00000640554 KCNJ4P48050 445 aa17.87■□□□□ 0.45
SDHD-209ENST00000640554 LDHDQ86WU2 507 aa17.87■□□□□ 0.45
SDHD-209ENST00000640554 DPF2Q92785 391 aa17.87■□□□□ 0.45
SDHD-209ENST00000640554 DBNDD1Q9H9R9 158 aa17.87■□□□□ 0.45
SDHD-209ENST00000640554 ZNF804BA4D1E1 1349 aa17.87■□□□□ 0.45
SDHD-209ENST00000640554 COL4A5P29400 1685 aa17.87■□□□□ 0.45
SDHD-209ENST00000640554 YDJCA8MPS7 323 aa17.86■□□□□ 0.45
SDHD-209ENST00000640554 RAD17O75943 681 aa17.86■□□□□ 0.45
SDHD-209ENST00000640554 MS4A1P11836 297 aa17.86■□□□□ 0.45
SDHD-209ENST00000640554 HSPA6P17066 643 aa17.86■□□□□ 0.45
SDHD-209ENST00000640554 C15orf52Q6ZUT6 534 aaKnown RBP17.86■□□□□ 0.45
SDHD-209ENST00000640554 ANKRD44Q8N8A2 993 aa17.86■□□□□ 0.45
SDHD-209ENST00000640554 COA1Q9GZY4 146 aa17.86■□□□□ 0.45
SDHD-209ENST00000640554 TAF1P21675 1872 aa17.86■□□□□ 0.45
SDHD-209ENST00000640554 MYH3P11055 1940 aa17.86■□□□□ 0.45
SDHD-209ENST00000640554 COL4A1P02462 1669 aa17.85■□□□□ 0.45
SDHD-209ENST00000640554 SCNN1DP51172 638 aa17.85■□□□□ 0.45
SDHD-209ENST00000640554 DOK7Q18PE1 504 aa17.85■□□□□ 0.45
SDHD-209ENST00000640554 CHADLQ6NUI6 762 aa17.85■□□□□ 0.45
SDHD-209ENST00000640554 MROH5Q6ZUA9 1318 aa17.85■□□□□ 0.45
SDHD-209ENST00000640554 USP50Q70EL3 339 aaPredicted RBP17.85■□□□□ 0.45
SDHD-209ENST00000640554 GPRC5DQ9NZD1 345 aa17.85■□□□□ 0.45
SDHD-209ENST00000640554 FBXO3Q9UK99 471 aa17.85■□□□□ 0.45
SDHD-209ENST00000640554 VIL1P09327 827 aaKnown RBP17.84■□□□□ 0.45
SDHD-209ENST00000640554 ZNF594Q96JF6 807 aaPredicted RBP17.84■□□□□ 0.45
SDHD-209ENST00000640554 ADARB2Q9NS39 739 aaKnown RBP17.84■□□□□ 0.45
SDHD-209ENST00000640554 H7C1D1 291 aa17.83■□□□□ 0.44
SDHD-209ENST00000640554 GMPSP49915 693 aaPredicted RBP17.83■□□□□ 0.44
SDHD-209ENST00000640554 MMP14P50281 582 aa17.83■□□□□ 0.44
SDHD-209ENST00000640554 APLP1P51693 650 aa17.83■□□□□ 0.44
SDHD-209ENST00000640554 UBE4AQ14139 1066 aa17.83■□□□□ 0.44
SDHD-209ENST00000640554 GPR101Q96P66 508 aaPredicted RBP17.83■□□□□ 0.44
SDHD-209ENST00000640554 RIPOR2Q9Y4F9 1068 aa17.83■□□□□ 0.44
SDHD-209ENST00000640554 LTBP1Q14766 1721 aa17.83■□□□□ 0.44
SDHD-209ENST00000640554 SCN4AP35499 1836 aa17.82■□□□□ 0.44
SDHD-209ENST00000640554 USP17L3A6NCW0 530 aa17.82■□□□□ 0.44
SDHD-209ENST00000640554 USP17L4A6NCW7 530 aa17.82■□□□□ 0.44
SDHD-209ENST00000640554 PSMD14O00487 310 aa17.82■□□□□ 0.44
SDHD-209ENST00000640554 EPS15P42566 896 aa17.82■□□□□ 0.44
SDHD-209ENST00000640554 USP17L1Q7RTZ2 530 aa17.82■□□□□ 0.44
SDHD-209ENST00000640554 FTSJ3Q8IY81 847 aaKnown RBP17.82■□□□□ 0.44
SDHD-209ENST00000640554 DZIP1LQ8IYY4 767 aaKnown RBP17.82■□□□□ 0.44
SDHD-209ENST00000640554 AGBL3Q8NEM8 1001 aa17.82■□□□□ 0.44
SDHD-209ENST00000640554 EAPPQ56P03 285 aaPredicted RBP17.81■□□□□ 0.44
SDHD-209ENST00000640554 CLUAP1Q96AJ1 413 aa17.81■□□□□ 0.44
SDHD-209ENST00000640554 MEIS3Q99687 375 aa17.81■□□□□ 0.44
SDHD-209ENST00000640554 CNOT7Q9UIV1 285 aaKnown RBP17.81■□□□□ 0.44
SDHD-209ENST00000640554 CLEC11AQ9Y240 323 aa17.81■□□□□ 0.44
SDHD-209ENST00000640554 LRRFIP2Q9Y608 721 aaKnown RBP17.81■□□□□ 0.44
SDHD-209ENST00000640554 TAF5LO75529 589 aa17.8■□□□□ 0.44
SDHD-209ENST00000640554 GNAI2P04899 355 aa17.8■□□□□ 0.44
SDHD-209ENST00000640554 STRIP1Q5VSL9 837 aa17.8■□□□□ 0.44
SDHD-209ENST00000640554 ZNF804AQ7Z570 1209 aa17.8■□□□□ 0.44
SDHD-209ENST00000640554 HELBQ8NG08 1087 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms