RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 UFL1O94874 794 aa18.38■□□□□ 0.53
HNRNPU-229ENST00000640440 USP50Q70EL3 339 aaPredicted RBP18.38■□□□□ 0.53
HNRNPU-229ENST00000640440 TTLL11Q8NHH1 800 aa18.38■□□□□ 0.53
HNRNPU-229ENST00000640440 CDC5LQ99459 802 aaKnown RBP18.38■□□□□ 0.53
HNRNPU-229ENST00000640440 GREM2Q9H772 168 aa18.38■□□□□ 0.53
HNRNPU-229ENST00000640440 PODXL2Q9NZ53 605 aa18.38■□□□□ 0.53
HNRNPU-229ENST00000640440 ZNF521Q96K83 1311 aa18.38■□□□□ 0.53
HNRNPU-229ENST00000640440 DOK7Q18PE1 504 aa18.37■□□□□ 0.53
HNRNPU-229ENST00000640440 LINS1Q8NG48 757 aa18.37■□□□□ 0.53
HNRNPU-229ENST00000640440 ADARB2Q9NS39 739 aaKnown RBP18.37■□□□□ 0.53
HNRNPU-229ENST00000640440 MKRN1Q9UHC7 482 aaKnown RBP18.37■□□□□ 0.53
HNRNPU-229ENST00000640440 GGA1Q9UJY5 639 aa18.37■□□□□ 0.53
HNRNPU-229ENST00000640440 F6X3S4 739 aa18.36■□□□□ 0.53
HNRNPU-229ENST00000640440 ECE2O60344 883 aa18.36■□□□□ 0.53
HNRNPU-229ENST00000640440 RTL9Q8NET4 1388 aa18.36■□□□□ 0.53
HNRNPU-229ENST00000640440 XDHP47989 1333 aa18.35■□□□□ 0.53
HNRNPU-229ENST00000640440 SHTN1A0MZ66 631 aa18.35■□□□□ 0.53
HNRNPU-229ENST00000640440 TMEM88BA6NKF7 163 aa18.35■□□□□ 0.53
HNRNPU-229ENST00000640440 PSMD14O00487 310 aa18.35■□□□□ 0.53
HNRNPU-229ENST00000640440 CASP7P55210 303 aa18.35■□□□□ 0.53
HNRNPU-229ENST00000640440 FAM161AQ3B820 660 aa18.34■□□□□ 0.53
HNRNPU-229ENST00000640440 PLA2G12BQ9BX93 195 aa18.34■□□□□ 0.53
HNRNPU-229ENST00000640440 ZC3H12CQ9C0D7 883 aaKnown RBP18.34■□□□□ 0.53
HNRNPU-229ENST00000640440 KCNQ5Q9NR82 932 aa18.34■□□□□ 0.53
HNRNPU-229ENST00000640440 ZBTB12Q9Y330 459 aaPredicted RBP18.34■□□□□ 0.53
HNRNPU-229ENST00000640440 A0A1B0GUL6 1792 aa18.34■□□□□ 0.53
HNRNPU-229ENST00000640440 CNTNAP1P78357 1384 aa18.33■□□□□ 0.53
HNRNPU-229ENST00000640440 MICALL2Q8IY33 904 aa18.33■□□□□ 0.52
HNRNPU-229ENST00000640440 TRPM4Q8TD43 1214 aa18.33■□□□□ 0.52
HNRNPU-229ENST00000640440 CNOT7Q9UIV1 285 aaKnown RBP18.33■□□□□ 0.52
HNRNPU-229ENST00000640440 G3V3G9 751 aa18.32■□□□□ 0.52
HNRNPU-229ENST00000640440 FMR1Q06787 632 aaKnown RBP eCLIP18.32■□□□□ 0.52
HNRNPU-229ENST00000640440 BEND3Q5T5X7 828 aa18.32■□□□□ 0.52
HNRNPU-229ENST00000640440 DCAF8Q5TAQ9 597 aa18.32■□□□□ 0.52
HNRNPU-229ENST00000640440 BSDC1Q9NW68 430 aaPredicted RBP18.32■□□□□ 0.52
HNRNPU-229ENST00000640440 H7C1D1 291 aa18.31■□□□□ 0.52
HNRNPU-229ENST00000640440 TRAF5O00463 557 aa18.31■□□□□ 0.52
HNRNPU-229ENST00000640440 ITGA6P23229 1130 aa18.31■□□□□ 0.52
HNRNPU-229ENST00000640440 ATP2B4P23634 1241 aa18.31■□□□□ 0.52
HNRNPU-229ENST00000640440 IGHMBP2P38935 993 aaKnown RBP18.31■□□□□ 0.52
HNRNPU-229ENST00000640440 MINPP1Q9UNW1 487 aa18.31■□□□□ 0.52
HNRNPU-229ENST00000640440 HIRAP54198 1017 aaPredicted RBP18.3■□□□□ 0.52
HNRNPU-229ENST00000640440 ABT1Q9ULW3 272 aaKnown RBP18.3■□□□□ 0.52
HNRNPU-229ENST00000640440 ZNF646O15015 1829 aaPredicted RBP18.3■□□□□ 0.52
HNRNPU-229ENST00000640440 WTIPA6NIX2 430 aaPredicted RBP18.29■□□□□ 0.52
HNRNPU-229ENST00000640440 E9PSI1 815 aa18.29■□□□□ 0.52
HNRNPU-229ENST00000640440 CSF1RP07333 972 aa18.29■□□□□ 0.52
HNRNPU-229ENST00000640440 HSPA1AP0DMV8 641 aaKnown RBP18.29■□□□□ 0.52
HNRNPU-229ENST00000640440 HSPA1BP0DMV9 641 aaKnown RBP18.29■□□□□ 0.52
HNRNPU-229ENST00000640440 RPS12P25398 132 aaKnown RBP18.29■□□□□ 0.52
HNRNPU-229ENST00000640440 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
HNRNPU-229ENST00000640440 DPF2Q92785 391 aa18.29■□□□□ 0.52
HNRNPU-229ENST00000640440 SAMD7Q7Z3H4 446 aa18.28■□□□□ 0.52
HNRNPU-229ENST00000640440 MPHOSPH8Q99549 860 aa18.28■□□□□ 0.52
HNRNPU-229ENST00000640440 GLIS2Q9BZE0 524 aaPredicted RBP18.28■□□□□ 0.52
HNRNPU-229ENST00000640440 CHMP3Q9Y3E7 222 aa18.28■□□□□ 0.52
HNRNPU-229ENST00000640440 MED23Q9ULK4 1368 aa18.28■□□□□ 0.52
HNRNPU-229ENST00000640440 GRM8O00222 908 aa18.27■□□□□ 0.52
HNRNPU-229ENST00000640440 EGFRP00533 1210 aa18.27■□□□□ 0.52
HNRNPU-229ENST00000640440 VIL1P09327 827 aaKnown RBP18.27■□□□□ 0.52
HNRNPU-229ENST00000640440 VEGFBP49765 207 aa18.27■□□□□ 0.52
HNRNPU-229ENST00000640440 CCT4P50991 539 aaKnown RBP18.27■□□□□ 0.52
HNRNPU-229ENST00000640440 FOXO4P98177 505 aa18.27■□□□□ 0.52
HNRNPU-229ENST00000640440 TBC1D10BQ4KMP7 808 aaPredicted RBP18.27■□□□□ 0.52
HNRNPU-229ENST00000640440 ZC3H15Q8WU90 426 aaKnown RBP18.27■□□□□ 0.52
HNRNPU-229ENST00000640440 ANKRD18BA2A2Z9 1011 aa18.26■□□□□ 0.51
HNRNPU-229ENST00000640440 RASSF10A6NK89 507 aa18.26■□□□□ 0.51
HNRNPU-229ENST00000640440 CCER2I3L3R5 266 aa18.26■□□□□ 0.51
HNRNPU-229ENST00000640440 ALDH1L1O75891 902 aa18.26■□□□□ 0.51
HNRNPU-229ENST00000640440 SLFN5Q08AF3 891 aa18.26■□□□□ 0.51
HNRNPU-229ENST00000640440 MRPL50Q8N5N7 158 aaKnown RBP18.26■□□□□ 0.51
HNRNPU-229ENST00000640440 C9orf78Q9NZ63 289 aaPredicted RBP18.26■□□□□ 0.51
HNRNPU-229ENST00000640440 PGAP2Q9UHJ9 254 aa18.26■□□□□ 0.51
HNRNPU-229ENST00000640440 IFIT5Q13325 482 aaKnown RBP18.25■□□□□ 0.51
HNRNPU-229ENST00000640440 DEFB115Q30KQ5 88 aa18.25■□□□□ 0.51
HNRNPU-229ENST00000640440 EPHA10Q5JZY3 1008 aa18.25■□□□□ 0.51
HNRNPU-229ENST00000640440 RBM26Q5T8P6 1007 aaKnown RBP18.25■□□□□ 0.51
HNRNPU-229ENST00000640440 CST9Q5W186 159 aa18.25■□□□□ 0.51
HNRNPU-229ENST00000640440 CDCA7LQ96GN5 454 aa18.25■□□□□ 0.51
HNRNPU-229ENST00000640440 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
HNRNPU-229ENST00000640440 ZNF609O15014 1411 aa18.24■□□□□ 0.51
HNRNPU-229ENST00000640440 CELF2O95319 508 aaKnown RBP18.24■□□□□ 0.51
HNRNPU-229ENST00000640440 KIF4BQ2VIQ3 1234 aa18.24■□□□□ 0.51
HNRNPU-229ENST00000640440 RSBN1LQ6PCB5 846 aaPredicted RBP18.24■□□□□ 0.51
HNRNPU-229ENST00000640440 PODNQ7Z5L7 613 aa18.24■□□□□ 0.51
HNRNPU-229ENST00000640440 ANKRD2Q9GZV1 360 aa18.24■□□□□ 0.51
HNRNPU-229ENST00000640440 LEMD3Q9Y2U8 911 aa18.24■□□□□ 0.51
HNRNPU-229ENST00000640440 ZNF804BA4D1E1 1349 aa18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 USP17L3A6NCW0 530 aa18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 USP17L4A6NCW7 530 aa18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 KLRK1P26718 216 aa18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 KCNJ4P48050 445 aa18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 CHRNDQ07001 517 aa18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 LMBR1LQ6UX01 489 aa18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 PAXIP1Q6ZW49 1069 aaPredicted RBP18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 CDC37L1Q7L3B6 337 aa18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 USP17L1Q7RTZ2 530 aa18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 TXNRD3Q86VQ6 643 aa18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 AGBL3Q8NEM8 1001 aa18.23■□□□□ 0.51
HNRNPU-229ENST00000640440 SSH1Q8WYL5 1049 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms