RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 KRT32Q14532 448 aa17.2■□□□□ 0.34
SCARB2-221ENST00000640341 MAP7D2Q96T17 732 aa17.2■□□□□ 0.34
SCARB2-221ENST00000640341 OTUD7BQ6GQQ9 843 aa17.2■□□□□ 0.34
SCARB2-221ENST00000640341 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
SCARB2-221ENST00000640341 MED23Q9ULK4 1368 aa17.2■□□□□ 0.34
SCARB2-221ENST00000640341 RIOK3O14730 519 aaKnown RBP17.19■□□□□ 0.34
SCARB2-221ENST00000640341 ME1P48163 572 aa17.19■□□□□ 0.34
SCARB2-221ENST00000640341 GORABQ5T7V8 394 aa17.19■□□□□ 0.34
SCARB2-221ENST00000640341 TTLL5Q6EMB2 1281 aa17.19■□□□□ 0.34
SCARB2-221ENST00000640341 IFNL2Q8IZJ0 200 aa17.19■□□□□ 0.34
SCARB2-221ENST00000640341 FILIP1Q7Z7B0 1213 aa17.19■□□□□ 0.34
SCARB2-221ENST00000640341 DDX19AQ9NUU7 478 aaKnown RBP17.19■□□□□ 0.34
SCARB2-221ENST00000640341 CLIP2Q9UDT6 1046 aa17.19■□□□□ 0.34
SCARB2-221ENST00000640341 U3KPZ7 1027 aaPredicted RBP17.19■□□□□ 0.34
SCARB2-221ENST00000640341 SPDYE4A6NLX3 237 aa17.18■□□□□ 0.34
SCARB2-221ENST00000640341 BECN2A8MW95 431 aa17.18■□□□□ 0.34
SCARB2-221ENST00000640341 WASHC4Q2M389 1173 aa17.18■□□□□ 0.34
SCARB2-221ENST00000640341 PRIMPOLQ96LW4 560 aa17.18■□□□□ 0.34
SCARB2-221ENST00000640341 FMNL2Q96PY5 1086 aa17.18■□□□□ 0.34
SCARB2-221ENST00000640341 COPRSQ9NQ92 184 aa17.18■□□□□ 0.34
SCARB2-221ENST00000640341 GPHNQ9NQX3 736 aaPredicted RBP17.18■□□□□ 0.34
SCARB2-221ENST00000640341 ZNF609O15014 1411 aa17.18■□□□□ 0.34
SCARB2-221ENST00000640341 PTPDC1A2A3K4 754 aa17.18■□□□□ 0.34
SCARB2-221ENST00000640341 TTLL7Q6ZT98 887 aa17.18■□□□□ 0.34
SCARB2-221ENST00000640341 CLSTN2Q9H4D0 955 aa17.18■□□□□ 0.34
SCARB2-221ENST00000640341 LRRC24Q50LG9 513 aa17.18■□□□□ 0.34
SCARB2-221ENST00000640341 CCAR1Q8IX12 1150 aaKnown RBP17.18■□□□□ 0.34
SCARB2-221ENST00000640341 NFAT5O94916 1531 aa17.17■□□□□ 0.34
SCARB2-221ENST00000640341 UTYO14607 1347 aa17.17■□□□□ 0.34
SCARB2-221ENST00000640341 CYP27B1O15528 508 aa17.17■□□□□ 0.34
SCARB2-221ENST00000640341 A1BGP04217 495 aa17.17■□□□□ 0.34
SCARB2-221ENST00000640341 ARID5BQ14865 1188 aa17.17■□□□□ 0.34
SCARB2-221ENST00000640341 BCL2L12Q9HB09 334 aa17.17■□□□□ 0.34
SCARB2-221ENST00000640341 PAG1Q9NWQ8 432 aa17.17■□□□□ 0.34
SCARB2-221ENST00000640341 POLR3DP05423 398 aaPredicted RBP17.17■□□□□ 0.34
SCARB2-221ENST00000640341 RFX5P48382 616 aaPredicted RBP17.17■□□□□ 0.34
SCARB2-221ENST00000640341 PPP4R3BQ5MIZ7 849 aa17.17■□□□□ 0.34
SCARB2-221ENST00000640341 IFIT1P09914 478 aaKnown RBP17.16■□□□□ 0.34
SCARB2-221ENST00000640341 RESTQ13127 1097 aa17.16■□□□□ 0.34
SCARB2-221ENST00000640341 ZNF710Q8N1W2 664 aa17.16■□□□□ 0.34
SCARB2-221ENST00000640341 DNAJC5Q9H3Z4 198 aa17.16■□□□□ 0.34
SCARB2-221ENST00000640341 CFAP45Q9UL16 551 aa17.16■□□□□ 0.34
SCARB2-221ENST00000640341 ELP1O95163 1332 aa17.16■□□□□ 0.34
SCARB2-221ENST00000640341 CCDC73Q6ZRK6 1079 aa17.16■□□□□ 0.34
SCARB2-221ENST00000640341 USP28Q96RU2 1077 aa17.16■□□□□ 0.34
SCARB2-221ENST00000640341 C11orf57Q6ZUT1 292 aaPredicted RBP17.15■□□□□ 0.34
SCARB2-221ENST00000640341 KBTBD3Q8NAB2 608 aa17.15■□□□□ 0.34
SCARB2-221ENST00000640341 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
SCARB2-221ENST00000640341 HEG1Q9ULI3 1381 aa17.15■□□□□ 0.34
SCARB2-221ENST00000640341 TPD52L1Q16890 204 aaPredicted RBP17.15■□□□□ 0.34
SCARB2-221ENST00000640341 HAUS7Q99871 368 aa17.15■□□□□ 0.34
SCARB2-221ENST00000640341 GJB4Q9NTQ9 266 aa17.15■□□□□ 0.34
SCARB2-221ENST00000640341 SF3A1Q15459 793 aaKnown RBP17.15■□□□□ 0.34
SCARB2-221ENST00000640341 DHX32Q7L7V1 743 aaKnown RBP17.15■□□□□ 0.34
SCARB2-221ENST00000640341 KINO60870 393 aaKnown RBP17.14■□□□□ 0.33
SCARB2-221ENST00000640341 ZNF75DP51815 510 aa17.14■□□□□ 0.33
SCARB2-221ENST00000640341 SDF4Q9BRK5 362 aa17.14■□□□□ 0.33
SCARB2-221ENST00000640341 SPTLC3Q9NUV7 552 aa17.14■□□□□ 0.33
SCARB2-221ENST00000640341 TRMT1Q9NXH9 659 aaKnown RBP17.14■□□□□ 0.33
SCARB2-221ENST00000640341 ISM2Q6H9L7 571 aa17.14■□□□□ 0.33
SCARB2-221ENST00000640341 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.33
SCARB2-221ENST00000640341 CCDC144BQ3MJ40 725 aa17.14■□□□□ 0.33
SCARB2-221ENST00000640341 CCDC144CPQ8IYA2 1237 aa17.14■□□□□ 0.33
SCARB2-221ENST00000640341 NSUN7Q8NE18 718 aaKnown RBP17.14■□□□□ 0.33
SCARB2-221ENST00000640341 BIN1O00499 593 aa17.13■□□□□ 0.33
SCARB2-221ENST00000640341 ZRSR1Q15695 479 aaKnown RBP17.13■□□□□ 0.33
SCARB2-221ENST00000640341 FSIP1Q8NA03 581 aa17.13■□□□□ 0.33
SCARB2-221ENST00000640341 TNNT1P13805 278 aa17.13■□□□□ 0.33
SCARB2-221ENST00000640341 NAA30Q147X3 362 aaPredicted RBP17.13■□□□□ 0.33
SCARB2-221ENST00000640341 ZSCAN25Q6NSZ9 544 aa17.13■□□□□ 0.33
SCARB2-221ENST00000640341 CACTINQ8WUQ7 758 aaKnown RBP17.13■□□□□ 0.33
SCARB2-221ENST00000640341 GOLPH3LQ9H4A5 285 aa17.13■□□□□ 0.33
SCARB2-221ENST00000640341 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
SCARB2-221ENST00000640341 A0A1B0GVL5 298 aa17.12■□□□□ 0.33
SCARB2-221ENST00000640341 E7EWF7 191 aa17.12■□□□□ 0.33
SCARB2-221ENST00000640341 TPM3P06753 285 aa17.12■□□□□ 0.33
SCARB2-221ENST00000640341 ATF3P18847 181 aa17.12■□□□□ 0.33
SCARB2-221ENST00000640341 TAF7LQ5H9L4 462 aa17.12■□□□□ 0.33
SCARB2-221ENST00000640341 USPL1Q5W0Q7 1092 aa17.12■□□□□ 0.33
SCARB2-221ENST00000640341 MTERF4Q7Z6M4 381 aaKnown RBP17.12■□□□□ 0.33
SCARB2-221ENST00000640341 KDM6AO15550 1401 aaPredicted RBP17.12■□□□□ 0.33
SCARB2-221ENST00000640341 A0A1B0GUL7 405 aa17.12■□□□□ 0.33
SCARB2-221ENST00000640341 HSPD1P10809 573 aaKnown RBP17.12■□□□□ 0.33
SCARB2-221ENST00000640341 MED1Q15648 1581 aaPredicted RBP17.12■□□□□ 0.33
SCARB2-221ENST00000640341 NCAPD2Q15021 1401 aa17.12■□□□□ 0.33
SCARB2-221ENST00000640341 CTDNEP1O95476 244 aa17.12■□□□□ 0.33
SCARB2-221ENST00000640341 PI16Q6UXB8 463 aa17.12■□□□□ 0.33
SCARB2-221ENST00000640341 DCAF5Q96JK2 942 aa17.12■□□□□ 0.33
SCARB2-221ENST00000640341 PDCL2Q8N4E4 241 aa17.11■□□□□ 0.33
SCARB2-221ENST00000640341 ZSCAN16Q9H4T2 348 aaPredicted RBP17.11■□□□□ 0.33
SCARB2-221ENST00000640341 NPHP1O15259 732 aa17.11■□□□□ 0.33
SCARB2-221ENST00000640341 IGSF3O75054 1194 aa17.11■□□□□ 0.33
SCARB2-221ENST00000640341 CWC25Q9NXE8 425 aaPredicted RBP17.11■□□□□ 0.33
SCARB2-221ENST00000640341 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCARB2-221ENST00000640341 V9GYY5 206 aaPredicted RBP17.11■□□□□ 0.33
SCARB2-221ENST00000640341 NBPF26B4DH59 902 aa17.11■□□□□ 0.33
SCARB2-221ENST00000640341 NBPF14Q5TI25 921 aa17.11■□□□□ 0.33
SCARB2-221ENST00000640341 NBPF10Q6P3W6 841 aaKnown RBP17.11■□□□□ 0.33
SCARB2-221ENST00000640341 NBPF15Q8N660 670 aa17.11■□□□□ 0.33
SCARB2-221ENST00000640341 PLBD2Q8NHP8 589 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms