RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 FAM177A1Q8N128 213 aaPredicted RBP6.56□□□□□ -1.36
SCARB2-218ENST00000639715 VEZTQ9HBM0 779 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 CCDC171Q6TFL3 1326 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 CAMSAP1Q5T5Y3 1602 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 CCP110O43303 1012 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 CTIFO43310 598 aaKnown RBP6.56□□□□□ -1.36
SCARB2-218ENST00000639715 ERLIN2O94905 339 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 HOXB7P09629 217 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 GCKP35557 465 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 UBE2HP62256 183 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 MCM6Q14566 821 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 CEP57Q86XR8 500 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 CCDC83Q8IWF9 413 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 HMG20BQ9P0W2 317 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 MAP3K5Q99683 1374 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 CEP152O94986 1710 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 ADGRB3O60242 1522 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 CHMLP26374 656 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 ACTN2P35609 894 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 SMC1AQ14683 1233 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 KRT24Q2M2I5 525 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 NOC3LQ8WTT2 800 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 SRRTQ9BXP5 876 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 ABCA6Q8N139 1617 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 EIF3CLB5ME19 914 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 IPO7O95373 1038 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 GBP2P32456 591 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 CLNS1AP54105 237 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 NAP1L1P55209 391 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 EIF3CQ99613 913 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 SPATS2LQ9NUQ6 558 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 MSH6P52701 1360 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 CAVIN2O95810 425 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 SETSIPP0DME0 302 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 MYL6BP14649 208 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 SNW1Q13573 536 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 RBBP5Q15291 538 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 AKAP4Q5JQC9 854 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 TTC19Q6DKK2 380 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 MPRIPQ6WCQ1 1025 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 ANKRD18AQ8IVF6 992 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 USHBP1Q8N6Y0 703 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 JMYQ8N9B5 988 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 PRPF38AQ8NAV1 312 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 SMARCE1Q969G3 411 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 CEP126Q9P2H0 1117 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 TBC1D2BQ9UPU7 963 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 U3KPZ7 1027 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 XIRP1Q702N8 1843 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 ARHGEF10O15013 1369 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 TTC36A6NLP5 189 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 TMCO5BA8MYB1 307 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 ERLIN1O75477 346 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 ZSCAN22P10073 491 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 SKILP12757 684 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 MUM1L1Q5H9M0 696 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 JPH2Q9BR39 696 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 ZCCHC17Q9NP64 241 aaKnown RBP6.55□□□□□ -1.36
SCARB2-218ENST00000639715 MAP3K2Q9Y2U5 619 aa6.55□□□□□ -1.36
SCARB2-218ENST00000639715 CEP170BQ9Y4F5 1589 aaPredicted RBP6.54□□□□□ -1.36
SCARB2-218ENST00000639715 IQGAP1P46940 1657 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 ERICH2A1L162 156 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 CEBPAP49715 358 aaPredicted RBP6.54□□□□□ -1.36
SCARB2-218ENST00000639715 STK38Q15208 465 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 ZSCAN25Q6NSZ9 544 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 KSR2Q6VAB6 950 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 NFXL1Q6ZNB6 911 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 ZGPATQ8N5A5 531 aaKnown RBP6.54□□□□□ -1.36
SCARB2-218ENST00000639715 CHAMP1Q96JM3 812 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 PHACTR2O75167 634 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 PEX19P40855 299 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 LIG3P49916 1009 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 LRMPQ12912 555 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 NBPF9Q3BBW0 867 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 ZC3H13Q5T200 1668 aaKnown RBP6.54□□□□□ -1.36
SCARB2-218ENST00000639715 KIAA1328Q86T90 577 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 ERCC4Q92889 916 aaPredicted RBP6.54□□□□□ -1.36
SCARB2-218ENST00000639715 BOLA2Q9H3K6 86 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 DDX19AQ9NUU7 478 aaKnown RBP6.54□□□□□ -1.36
SCARB2-218ENST00000639715 EBAG9O00559 213 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 PNMA6AP0CW24 399 aaPredicted RBP6.54□□□□□ -1.36
SCARB2-218ENST00000639715 STK3Q13188 491 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 TSHZ3Q63HK5 1081 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 KIF6Q6ZMV9 814 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 MKRN1Q9UHC7 482 aaKnown RBP6.54□□□□□ -1.36
SCARB2-218ENST00000639715 SH3BP1Q9Y3L3 701 aa6.54□□□□□ -1.36
SCARB2-218ENST00000639715 NCKAP5LQ9HCH0 1330 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 CTAGE5O15320 804 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 FOXO3O43524 673 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 CCDC57Q2TAC2 916 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 OLFM4Q6UX06 510 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 G2E3Q7L622 706 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 LINS1Q8NG48 757 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 SGSM3Q96HU1 749 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 LCMT1Q9UIC8 334 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 MYO6Q9UM54 1294 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 DIP2CQ9Y2E4 1556 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 RTL1A6NKG5 1358 aa6.53□□□□□ -1.36
SCARB2-218ENST00000639715 TMEM2Q9UHN6 1383 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms