RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 ST5P78524 1137 aa8.24□□□□□ -1.09
RTTN-215ENST00000639487 RCSD1Q6JBY9 416 aa8.24□□□□□ -1.09
RTTN-215ENST00000639487 UTP14AQ9BVJ6 771 aaKnown RBP8.24□□□□□ -1.09
RTTN-215ENST00000639487 ATP8B2P98198 1209 aa8.24□□□□□ -1.09
RTTN-215ENST00000639487 NFIXQ14938 502 aa8.24□□□□□ -1.09
RTTN-215ENST00000639487 TANGO6Q9C0B7 1094 aa8.24□□□□□ -1.09
RTTN-215ENST00000639487 DDX19BQ9UMR2 479 aa8.24□□□□□ -1.09
RTTN-215ENST00000639487 PLA2G6O60733 806 aa8.24□□□□□ -1.09
RTTN-215ENST00000639487 C8orf58Q8NAV2 365 aa8.24□□□□□ -1.09
RTTN-215ENST00000639487 DEFB129Q9H1M3 183 aa8.24□□□□□ -1.09
RTTN-215ENST00000639487 MAST3O60307 1309 aa8.23□□□□□ -1.09
RTTN-215ENST00000639487 VIL1P09327 827 aaKnown RBP8.23□□□□□ -1.09
RTTN-215ENST00000639487 PPP4CP60510 307 aa8.23□□□□□ -1.09
RTTN-215ENST00000639487 KIAA2012Q0VF49 1180 aa8.23□□□□□ -1.09
RTTN-215ENST00000639487 DDX10Q13206 875 aaKnown RBP8.23□□□□□ -1.09
RTTN-215ENST00000639487 MVPQ14764 893 aaKnown RBP8.23□□□□□ -1.09
RTTN-215ENST00000639487 ANKRD13DQ6ZTN6 518 aa8.23□□□□□ -1.09
RTTN-215ENST00000639487 DNAJC10Q8IXB1 793 aa8.23□□□□□ -1.09
RTTN-215ENST00000639487 GCC1Q96CN9 775 aa8.23□□□□□ -1.09
RTTN-215ENST00000639487 ZBTB1Q9Y2K1 713 aa8.23□□□□□ -1.09
RTTN-215ENST00000639487 MYH6P13533 1939 aa8.23□□□□□ -1.09
RTTN-215ENST00000639487 CSB-PGBD3P0DP91 1061 aa8.23□□□□□ -1.09
RTTN-215ENST00000639487 GTF2E1P29083 439 aaPredicted RBP8.23□□□□□ -1.09
RTTN-215ENST00000639487 EHD4Q9H223 541 aa8.23□□□□□ -1.09
RTTN-215ENST00000639487 SRCIN1Q9C0H9 1055 aa8.22□□□□□ -1.09
RTTN-215ENST00000639487 SPINK5Q9NQ38 1064 aaPredicted RBP8.22□□□□□ -1.09
RTTN-215ENST00000639487 ZNF112Q9UJU3 913 aa8.22□□□□□ -1.09
RTTN-215ENST00000639487 APAF1O14727 1248 aa8.22□□□□□ -1.09
RTTN-215ENST00000639487 IRX6P78412 446 aaPredicted RBP8.22□□□□□ -1.09
RTTN-215ENST00000639487 ALX1Q15699 326 aa8.22□□□□□ -1.09
RTTN-215ENST00000639487 ZMYND15Q9H091 742 aa8.22□□□□□ -1.09
RTTN-215ENST00000639487 MRS2Q9HD23 443 aa8.22□□□□□ -1.09
RTTN-215ENST00000639487 XDHP47989 1333 aa8.22□□□□□ -1.09
RTTN-215ENST00000639487 PDCD11Q14690 1871 aaKnown RBP8.22□□□□□ -1.09
RTTN-215ENST00000639487 DZIP3Q86Y13 1208 aaKnown RBP8.22□□□□□ -1.09
RTTN-215ENST00000639487 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.22□□□□□ -1.09
RTTN-215ENST00000639487 COA1Q9GZY4 146 aa8.22□□□□□ -1.09
RTTN-215ENST00000639487 GRM8O00222 908 aa8.21□□□□□ -1.09
RTTN-215ENST00000639487 CDK11BP21127 795 aaKnown RBP8.21□□□□□ -1.09
RTTN-215ENST00000639487 POLD1P28340 1107 aa8.21□□□□□ -1.09
RTTN-215ENST00000639487 TPTE2Q6XPS3 522 aa8.21□□□□□ -1.09
RTTN-215ENST00000639487 LBX2Q6XYB7 198 aa8.21□□□□□ -1.09
RTTN-215ENST00000639487 COL4A4P53420 1690 aaPredicted RBP8.21□□□□□ -1.1
RTTN-215ENST00000639487 TRIM37O94972 964 aa8.21□□□□□ -1.1
RTTN-215ENST00000639487 TSGA10IPQ3SY00 556 aa8.21□□□□□ -1.1
RTTN-215ENST00000639487 KCNN1Q92952 543 aa8.21□□□□□ -1.1
RTTN-215ENST00000639487 MAP3K14Q99558 947 aa8.21□□□□□ -1.1
RTTN-215ENST00000639487 USP50Q70EL3 339 aaPredicted RBP8.2□□□□□ -1.1
RTTN-215ENST00000639487 TDRD7Q8NHU6 1098 aaKnown RBP8.2□□□□□ -1.1
RTTN-215ENST00000639487 DCTPP1Q9H773 170 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 ANAPC4Q9UJX5 808 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 CNTNAP1P78357 1384 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 ZKSCAN2Q63HK3 967 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 HHIPL2Q6UWX4 724 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 TTLL11Q8NHH1 800 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 CCDC152Q4G0S7 254 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 TBC1D9BQ66K14 1250 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 MPRIPQ6WCQ1 1025 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 AMIGO3Q86WK7 504 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 USP44Q9H0E7 712 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 USP16Q9Y5T5 823 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 ADGRA2Q96PE1 1338 aa8.2□□□□□ -1.1
RTTN-215ENST00000639487 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.19□□□□□ -1.1
RTTN-215ENST00000639487 HOXC6P09630 235 aa8.19□□□□□ -1.1
RTTN-215ENST00000639487 CCDC93Q567U6 631 aa8.19□□□□□ -1.1
RTTN-215ENST00000639487 FAM83AQ86UY5 434 aa8.19□□□□□ -1.1
RTTN-215ENST00000639487 ANKS1AQ92625 1134 aa8.19□□□□□ -1.1
RTTN-215ENST00000639487 STRN4Q9NRL3 753 aa8.19□□□□□ -1.1
RTTN-215ENST00000639487 IL15P40933 162 aaPredicted RBP8.19□□□□□ -1.1
RTTN-215ENST00000639487 ATG9AQ7Z3C6 839 aa8.19□□□□□ -1.1
RTTN-215ENST00000639487 PODNQ7Z5L7 613 aa8.19□□□□□ -1.1
RTTN-215ENST00000639487 TBC1D22AQ8WUA7 517 aa8.19□□□□□ -1.1
RTTN-215ENST00000639487 IDI2Q9BXS1 227 aa8.19□□□□□ -1.1
RTTN-215ENST00000639487 SERPINB2P05120 415 aa8.18□□□□□ -1.1
RTTN-215ENST00000639487 TMEM132AQ24JP5 1023 aa8.18□□□□□ -1.1
RTTN-215ENST00000639487 ANKRD23Q86SG2 305 aa8.18□□□□□ -1.1
RTTN-215ENST00000639487 GPC2Q8N158 579 aa8.18□□□□□ -1.1
RTTN-215ENST00000639487 JMYQ8N9B5 988 aa8.18□□□□□ -1.1
RTTN-215ENST00000639487 NAP1L5Q96NT1 182 aaPredicted RBP8.18□□□□□ -1.1
RTTN-215ENST00000639487 SERPINA10Q9UK55 444 aa8.18□□□□□ -1.1
RTTN-215ENST00000639487 PARP3Q9Y6F1 533 aa8.18□□□□□ -1.1
RTTN-215ENST00000639487 NUTM2BA6NNL0 878 aaPredicted RBP8.18□□□□□ -1.1
RTTN-215ENST00000639487 NUTM2EB1AL46 878 aaPredicted RBP8.18□□□□□ -1.1
RTTN-215ENST00000639487 HDGFL1Q5TGJ6 251 aa8.18□□□□□ -1.1
RTTN-215ENST00000639487 NUTM2AQ8IVF1 878 aaPredicted RBP8.18□□□□□ -1.1
RTTN-215ENST00000639487 ZGPATQ8N5A5 531 aaKnown RBP8.18□□□□□ -1.1
RTTN-215ENST00000639487 EYA3Q99504 573 aa8.18□□□□□ -1.1
RTTN-215ENST00000639487 STRIP1Q5VSL9 837 aa8.18□□□□□ -1.1
RTTN-215ENST00000639487 FAM89AQ96GI7 184 aa8.18□□□□□ -1.1
RTTN-215ENST00000639487 SUPT16HQ9Y5B9 1047 aaKnown RBP8.18□□□□□ -1.1
RTTN-215ENST00000639487 SUSD4Q5VX71 490 aa8.17□□□□□ -1.1
RTTN-215ENST00000639487 PPP4R3BQ5MIZ7 849 aa8.17□□□□□ -1.1
RTTN-215ENST00000639487 GTF3C2Q8WUA4 911 aaPredicted RBP8.17□□□□□ -1.1
RTTN-215ENST00000639487 SSH1Q8WYL5 1049 aa8.17□□□□□ -1.1
RTTN-215ENST00000639487 CHPF2Q9P2E5 772 aa8.17□□□□□ -1.1
RTTN-215ENST00000639487 KIF26AQ9ULI4 1882 aaPredicted RBP8.16□□□□□ -1.1
RTTN-215ENST00000639487 SLC5A1P13866 664 aa8.16□□□□□ -1.1
RTTN-215ENST00000639487 RRP1P56182 461 aaKnown RBP8.16□□□□□ -1.1
RTTN-215ENST00000639487 MCM10Q7L590 875 aa8.16□□□□□ -1.1
RTTN-215ENST00000639487 STK31Q9BXU1 1019 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms