RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 SLC4A9Q96Q91 983 aa22.06■■□□□ 1.12
CTSD-212ENST00000637815 CEP126Q9P2H0 1117 aa22.06■■□□□ 1.12
CTSD-212ENST00000637815 NECAB1Q8N987 351 aa22.06■■□□□ 1.12
CTSD-212ENST00000637815 GDPD2Q9HCC8 539 aa22.06■■□□□ 1.12
CTSD-212ENST00000637815 FOXD4L6Q3SYB3 417 aaPredicted RBP22.05■■□□□ 1.12
CTSD-212ENST00000637815 ZMYM1Q5SVZ6 1142 aa22.05■■□□□ 1.12
CTSD-212ENST00000637815 FOXD4L3Q6VB84 417 aaPredicted RBP22.05■■□□□ 1.12
CTSD-212ENST00000637815 FAM89AQ96GI7 184 aa22.05■■□□□ 1.12
CTSD-212ENST00000637815 CCDC9Q9Y3X0 531 aaKnown RBP22.05■■□□□ 1.12
CTSD-212ENST00000637815 NRAPQ86VF7 1730 aa22.05■■□□□ 1.12
CTSD-212ENST00000637815 IFIT1P09914 478 aaKnown RBP22.04■■□□□ 1.12
CTSD-212ENST00000637815 CCDC173Q0VFZ6 552 aa22.04■■□□□ 1.12
CTSD-212ENST00000637815 HSP90AB3PQ58FF7 597 aa22.04■■□□□ 1.12
CTSD-212ENST00000637815 SYAP1Q96A49 352 aaPredicted RBP22.04■■□□□ 1.12
CTSD-212ENST00000637815 PPP1R9BQ96SB3 815 aa22.04■■□□□ 1.12
CTSD-212ENST00000637815 RRAGDQ9NQL2 400 aaPredicted RBP22.04■■□□□ 1.12
CTSD-212ENST00000637815 AKAP2Q9Y2D5 859 aa22.04■■□□□ 1.12
CTSD-212ENST00000637815 EXOC5O00471 708 aa22.04■■□□□ 1.12
CTSD-212ENST00000637815 GADD45BO75293 160 aaPredicted RBP22.04■■□□□ 1.12
CTSD-212ENST00000637815 CYP21A2P08686 494 aa22.04■■□□□ 1.12
CTSD-212ENST00000637815 TCEANC2Q96MN5 208 aa22.04■■□□□ 1.12
CTSD-212ENST00000637815 NEK1Q96PY6 1258 aa22.04■■□□□ 1.12
CTSD-212ENST00000637815 DSCC1Q9BVC3 393 aa22.04■■□□□ 1.12
CTSD-212ENST00000637815 SYCE3A1L190 88 aa22.03■■□□□ 1.12
CTSD-212ENST00000637815 HLFQ16534 295 aa22.03■■□□□ 1.12
CTSD-212ENST00000637815 NLRP10Q86W26 655 aa22.03■■□□□ 1.12
CTSD-212ENST00000637815 RBSNQ9H1K0 784 aa22.03■■□□□ 1.12
CTSD-212ENST00000637815 CNPY2Q9Y2B0 182 aa22.03■■□□□ 1.12
CTSD-212ENST00000637815 IFIT5Q13325 482 aaKnown RBP22.02■■□□□ 1.12
CTSD-212ENST00000637815 RIC1Q4ADV7 1423 aa22.02■■□□□ 1.11
CTSD-212ENST00000637815 AKAP11Q9UKA4 1901 aa22.01■■□□□ 1.11
CTSD-212ENST00000637815 RNF113AO15541 343 aaKnown RBP22.01■■□□□ 1.11
CTSD-212ENST00000637815 PDCP20941 246 aa22.01■■□□□ 1.11
CTSD-212ENST00000637815 ANP32BQ92688 251 aaKnown RBP22.01■■□□□ 1.11
CTSD-212ENST00000637815 ZBTB1Q9Y2K1 713 aa22.01■■□□□ 1.11
CTSD-212ENST00000637815 ABCC12Q96J65 1359 aa22■■□□□ 1.11
CTSD-212ENST00000637815 CCDC158Q5M9N0 1113 aa22■■□□□ 1.11
CTSD-212ENST00000637815 XAGE2Q96GT9 111 aa22■■□□□ 1.11
CTSD-212ENST00000637815 MAST3O60307 1309 aa21.99■■□□□ 1.11
CTSD-212ENST00000637815 UBE2HP62256 183 aa21.99■■□□□ 1.11
CTSD-212ENST00000637815 TAF7LQ5H9L4 462 aa21.99■■□□□ 1.11
CTSD-212ENST00000637815 ERVV-1B6SEH8 477 aa21.99■■□□□ 1.11
CTSD-212ENST00000637815 PHF14O94880 888 aa21.99■■□□□ 1.11
CTSD-212ENST00000637815 HMGB1P09429 215 aaKnown RBP21.99■■□□□ 1.11
CTSD-212ENST00000637815 ADORA1P30542 326 aa21.99■■□□□ 1.11
CTSD-212ENST00000637815 SLFNL1Q499Z3 407 aa21.99■■□□□ 1.11
CTSD-212ENST00000637815 LARP1BQ659C4 914 aaKnown RBP21.99■■□□□ 1.11
CTSD-212ENST00000637815 TTLL11Q8NHH1 800 aa21.99■■□□□ 1.11
CTSD-212ENST00000637815 CDCA7Q9BWT1 371 aaPredicted RBP21.99■■□□□ 1.11
CTSD-212ENST00000637815 CICQ96RK0 1608 aaPredicted RBP21.98■■□□□ 1.11
CTSD-212ENST00000637815 GPTP24298 496 aa21.98■■□□□ 1.11
CTSD-212ENST00000637815 IL6STP40189 918 aaPredicted RBP21.98■■□□□ 1.11
CTSD-212ENST00000637815 CSPP1Q1MSJ5 1256 aa21.98■■□□□ 1.11
CTSD-212ENST00000637815 STOX1Q6ZVD7 989 aa21.98■■□□□ 1.11
CTSD-212ENST00000637815 SYNE4Q8N205 404 aa21.98■■□□□ 1.11
CTSD-212ENST00000637815 RIPOR2Q9Y4F9 1068 aa21.98■■□□□ 1.11
CTSD-212ENST00000637815 RREB1Q92766 1687 aa21.98■■□□□ 1.11
CTSD-212ENST00000637815 VPS37CA5D8V6 355 aaPredicted RBP21.97■■□□□ 1.11
CTSD-212ENST00000637815 HSPD1P10809 573 aaKnown RBP21.97■■□□□ 1.11
CTSD-212ENST00000637815 CTSWP56202 376 aa21.97■■□□□ 1.11
CTSD-212ENST00000637815 LRRFIP1Q32MZ4 808 aaKnown RBP21.97■■□□□ 1.11
CTSD-212ENST00000637815 TTC39AQ5SRH9 613 aa21.97■■□□□ 1.11
CTSD-212ENST00000637815 GTF3C6Q969F1 213 aa21.97■■□□□ 1.11
CTSD-212ENST00000637815 TRIM44Q96DX7 344 aaPredicted RBP21.97■■□□□ 1.11
CTSD-212ENST00000637815 NWD2Q9ULI1 1742 aa21.97■■□□□ 1.11
CTSD-212ENST00000637815 LRP5O75197 1615 aa21.97■■□□□ 1.11
CTSD-212ENST00000637815 DTNBO60941 627 aa21.97■■□□□ 1.11
CTSD-212ENST00000637815 Q6ZUG5 572 aa21.97■■□□□ 1.11
CTSD-212ENST00000637815 CCDC85AQ96PX6 553 aaPredicted RBP21.97■■□□□ 1.11
CTSD-212ENST00000637815 PHLPP1O60346 1717 aa21.97■■□□□ 1.11
CTSD-212ENST00000637815 DNM1Q05193 864 aaKnown RBP21.96■■□□□ 1.11
CTSD-212ENST00000637815 GORABQ5T7V8 394 aa21.96■■□□□ 1.11
CTSD-212ENST00000637815 SYTL4Q96C24 671 aaPredicted RBP21.96■■□□□ 1.11
CTSD-212ENST00000637815 ARAP2Q8WZ64 1704 aa21.96■■□□□ 1.11
CTSD-212ENST00000637815 ZFYP08048 801 aaPredicted RBP21.96■■□□□ 1.11
CTSD-212ENST00000637815 ITGA6P23229 1130 aa21.96■■□□□ 1.11
CTSD-212ENST00000637815 GREM2Q9H772 168 aa21.96■■□□□ 1.11
CTSD-212ENST00000637815 FIBPO43427 364 aa21.95■■□□□ 1.1
CTSD-212ENST00000637815 FKBP4Q02790 459 aaKnown RBP eCLIP21.95■■□□□ 1.1
CTSD-212ENST00000637815 CDC37L1Q7L3B6 337 aa21.95■■□□□ 1.1
CTSD-212ENST00000637815 DHX32Q7L7V1 743 aaKnown RBP21.95■■□□□ 1.1
CTSD-212ENST00000637815 THRAP3Q9Y2W1 955 aaKnown RBP21.95■■□□□ 1.1
CTSD-212ENST00000637815 SPATA31A1Q5TZJ5 1347 aa21.94■■□□□ 1.1
CTSD-212ENST00000637815 M0R2C6 588 aa21.94■■□□□ 1.1
CTSD-212ENST00000637815 IRS4O14654 1257 aaPredicted RBP21.94■■□□□ 1.1
CTSD-212ENST00000637815 CCDC183Q5T5S1 534 aa21.94■■□□□ 1.1
CTSD-212ENST00000637815 DZIP3Q86Y13 1208 aaKnown RBP21.94■■□□□ 1.1
CTSD-212ENST00000637815 AGXT2Q9BYV1 514 aa21.94■■□□□ 1.1
CTSD-212ENST00000637815 ANKRD18BA2A2Z9 1011 aa21.94■■□□□ 1.1
CTSD-212ENST00000637815 STK3Q13188 491 aa21.94■■□□□ 1.1
CTSD-212ENST00000637815 ATP2B3Q16720 1220 aa21.94■■□□□ 1.1
CTSD-212ENST00000637815 OSBP2Q969R2 916 aa21.94■■□□□ 1.1
CTSD-212ENST00000637815 PDLIM2Q96JY6 352 aa21.94■■□□□ 1.1
CTSD-212ENST00000637815 TSPY26PQ9H489 355 aa21.94■■□□□ 1.1
CTSD-212ENST00000637815 TRMT112Q9UI30 125 aaKnown RBP21.94■■□□□ 1.1
CTSD-212ENST00000637815 LTBP4Q8N2S1 1624 aa21.93■■□□□ 1.1
CTSD-212ENST00000637815 MYO5AQ9Y4I1 1855 aaKnown RBP21.93■■□□□ 1.1
CTSD-212ENST00000637815 SLIT2O94813 1529 aa21.93■■□□□ 1.1
CTSD-212ENST00000637815 ESPNB1AK53 854 aa21.93■■□□□ 1.1
CTSD-212ENST00000637815 PDE8AO60658 829 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms