RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 COPS6Q7L5N1 327 aa17.18■□□□□ 0.34
CLN6-215ENST00000636674 PLA2G4DQ86XP0 818 aa17.18■□□□□ 0.34
CLN6-215ENST00000636674 ZNF710Q8N1W2 664 aa17.18■□□□□ 0.34
CLN6-215ENST00000636674 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
CLN6-215ENST00000636674 PGBD1Q96JS3 809 aa17.18■□□□□ 0.34
CLN6-215ENST00000636674 HAUS7Q99871 368 aa17.18■□□□□ 0.34
CLN6-215ENST00000636674 CCDC94Q9BW85 323 aaPredicted RBP17.18■□□□□ 0.34
CLN6-215ENST00000636674 SPEF2Q9C093 1822 aa17.17■□□□□ 0.34
CLN6-215ENST00000636674 COL18A1P39060 1754 aa17.17■□□□□ 0.34
CLN6-215ENST00000636674 CAMK4Q16566 473 aa17.17■□□□□ 0.34
CLN6-215ENST00000636674 LUZP1Q86V48 1076 aa17.17■□□□□ 0.34
CLN6-215ENST00000636674 SOS2Q07890 1332 aaPredicted RBP17.16■□□□□ 0.34
CLN6-215ENST00000636674 ANKRD13DQ6ZTN6 518 aa17.16■□□□□ 0.34
CLN6-215ENST00000636674 BRF1Q92994 677 aa17.16■□□□□ 0.34
CLN6-215ENST00000636674 EDC3Q96F86 508 aaKnown RBP17.16■□□□□ 0.34
CLN6-215ENST00000636674 JAK2O60674 1132 aa17.16■□□□□ 0.34
CLN6-215ENST00000636674 HMGB1P09429 215 aaKnown RBP17.16■□□□□ 0.34
CLN6-215ENST00000636674 PHKG2P15735 406 aa17.16■□□□□ 0.34
CLN6-215ENST00000636674 TFCP2Q12800 502 aa17.16■□□□□ 0.34
CLN6-215ENST00000636674 CHAF1AQ13111 956 aaPredicted RBP17.16■□□□□ 0.34
CLN6-215ENST00000636674 MCMDC2Q4G0Z9 681 aa17.16■□□□□ 0.34
CLN6-215ENST00000636674 SPC24Q8NBT2 197 aa17.16■□□□□ 0.34
CLN6-215ENST00000636674 DDX17Q92841 729 aaKnown RBP17.16■□□□□ 0.34
CLN6-215ENST00000636674 TFIP11Q9UBB9 837 aaKnown RBP17.16■□□□□ 0.34
CLN6-215ENST00000636674 CFAP45Q9UL16 551 aa17.16■□□□□ 0.34
CLN6-215ENST00000636674 MEGF6O75095 1541 aa17.16■□□□□ 0.34
CLN6-215ENST00000636674 NR1I2O75469 434 aa17.15■□□□□ 0.34
CLN6-215ENST00000636674 CYP21A2P08686 494 aa17.15■□□□□ 0.34
CLN6-215ENST00000636674 MYL6BP14649 208 aa17.15■□□□□ 0.34
CLN6-215ENST00000636674 CDC25BP30305 580 aa17.15■□□□□ 0.34
CLN6-215ENST00000636674 ZNF75DP51815 510 aa17.15■□□□□ 0.34
CLN6-215ENST00000636674 STK3Q13188 491 aa17.15■□□□□ 0.34
CLN6-215ENST00000636674 SLC39A6Q13433 755 aa17.15■□□□□ 0.34
CLN6-215ENST00000636674 NAA16Q6N069 864 aaPredicted RBP17.15■□□□□ 0.34
CLN6-215ENST00000636674 Q6ZUG5 572 aa17.15■□□□□ 0.34
CLN6-215ENST00000636674 CKAP2LQ8IYA6 745 aa17.15■□□□□ 0.34
CLN6-215ENST00000636674 RAPGEF4Q8WZA2 1011 aa17.15■□□□□ 0.34
CLN6-215ENST00000636674 PFKFB2O60825 505 aa17.14■□□□□ 0.34
CLN6-215ENST00000636674 PTGS1P23219 599 aa17.14■□□□□ 0.34
CLN6-215ENST00000636674 SMAP1Q8IYB5 467 aaPredicted RBP17.14■□□□□ 0.34
CLN6-215ENST00000636674 AGXT2Q9BYV1 514 aa17.14■□□□□ 0.34
CLN6-215ENST00000636674 CHMP3Q9Y3E7 222 aa17.14■□□□□ 0.34
CLN6-215ENST00000636674 NUP188Q5SRE5 1749 aa17.14■□□□□ 0.33
CLN6-215ENST00000636674 SNRPA1P09661 255 aaKnown RBP17.14■□□□□ 0.33
CLN6-215ENST00000636674 CASP7P55210 303 aa17.14■□□□□ 0.33
CLN6-215ENST00000636674 KBTBD3Q8NAB2 608 aa17.14■□□□□ 0.33
CLN6-215ENST00000636674 BICD2Q8TD16 824 aa17.14■□□□□ 0.33
CLN6-215ENST00000636674 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
CLN6-215ENST00000636674 TJP1Q07157 1748 aa17.14■□□□□ 0.33
CLN6-215ENST00000636674 SPATA31A6Q5VVP1 1343 aa17.13■□□□□ 0.33
CLN6-215ENST00000636674 ATL3Q6DD88 541 aa17.13■□□□□ 0.33
CLN6-215ENST00000636674 SARM1Q6SZW1 724 aa17.13■□□□□ 0.33
CLN6-215ENST00000636674 PKNOX2Q96KN3 472 aa17.13■□□□□ 0.33
CLN6-215ENST00000636674 CTAGE5O15320 804 aa17.13■□□□□ 0.33
CLN6-215ENST00000636674 CTIFO43310 598 aaKnown RBP17.13■□□□□ 0.33
CLN6-215ENST00000636674 ZNF165P49910 485 aa17.13■□□□□ 0.33
CLN6-215ENST00000636674 SCRN1Q12765 414 aa17.13■□□□□ 0.33
CLN6-215ENST00000636674 DBNDD2Q9BQY9 259 aa17.13■□□□□ 0.33
CLN6-215ENST00000636674 DSCC1Q9BVC3 393 aa17.13■□□□□ 0.33
CLN6-215ENST00000636674 H3BQV1 296 aa17.12■□□□□ 0.33
CLN6-215ENST00000636674 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
CLN6-215ENST00000636674 ADD1P35611 737 aaKnown RBP17.12■□□□□ 0.33
CLN6-215ENST00000636674 IFFO2Q5TF58 517 aa17.12■□□□□ 0.33
CLN6-215ENST00000636674 KRT28Q7Z3Y7 464 aa17.12■□□□□ 0.33
CLN6-215ENST00000636674 IFNL2Q8IZJ0 200 aa17.12■□□□□ 0.33
CLN6-215ENST00000636674 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
CLN6-215ENST00000636674 BCL2L12Q9HB09 334 aa17.12■□□□□ 0.33
CLN6-215ENST00000636674 GPR108Q9NPR9 543 aa17.12■□□□□ 0.33
CLN6-215ENST00000636674 HELLSQ9NRZ9 838 aa17.12■□□□□ 0.33
CLN6-215ENST00000636674 COL22A1Q8NFW1 1626 aaPredicted RBP17.12■□□□□ 0.33
CLN6-215ENST00000636674 HSP90B1P14625 803 aaKnown RBP17.11■□□□□ 0.33
CLN6-215ENST00000636674 STOX1Q6ZVD7 989 aa17.11■□□□□ 0.33
CLN6-215ENST00000636674 DHX32Q7L7V1 743 aaKnown RBP17.11■□□□□ 0.33
CLN6-215ENST00000636674 CCDC186Q7Z3E2 898 aa17.11■□□□□ 0.33
CLN6-215ENST00000636674 UBE3BQ7Z3V4 1068 aa17.11■□□□□ 0.33
CLN6-215ENST00000636674 NSUN7Q8NE18 718 aaKnown RBP17.11■□□□□ 0.33
CLN6-215ENST00000636674 RCOR1Q9UKL0 485 aa17.11■□□□□ 0.33
CLN6-215ENST00000636674 SALL1Q9NSC2 1324 aa17.11■□□□□ 0.33
CLN6-215ENST00000636674 RIOK3O14730 519 aaKnown RBP17.11■□□□□ 0.33
CLN6-215ENST00000636674 CCDC129Q6ZRS4 1044 aa17.11■□□□□ 0.33
CLN6-215ENST00000636674 FMNL2Q96PY5 1086 aa17.11■□□□□ 0.33
CLN6-215ENST00000636674 DNAJC2Q99543 621 aaKnown RBP17.11■□□□□ 0.33
CLN6-215ENST00000636674 LRP6O75581 1613 aa17.1■□□□□ 0.33
CLN6-215ENST00000636674 ZSCAN25Q6NSZ9 544 aa17.1■□□□□ 0.33
CLN6-215ENST00000636674 PLBD2Q8NHP8 589 aa17.1■□□□□ 0.33
CLN6-215ENST00000636674 ANKRD7Q92527 254 aa17.1■□□□□ 0.33
CLN6-215ENST00000636674 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
CLN6-215ENST00000636674 DCAF5Q96JK2 942 aa17.1■□□□□ 0.33
CLN6-215ENST00000636674 SEC62Q99442 399 aaKnown RBP17.1■□□□□ 0.33
CLN6-215ENST00000636674 TRIM5Q9C035 493 aa17.1■□□□□ 0.33
CLN6-215ENST00000636674 DNAJC25Q9H1X3 360 aa17.1■□□□□ 0.33
CLN6-215ENST00000636674 USP16Q9Y5T5 823 aa17.1■□□□□ 0.33
CLN6-215ENST00000636674 UBR2Q8IWV8 1755 aa17.1■□□□□ 0.33
CLN6-215ENST00000636674 EXOSC10Q01780 885 aaKnown RBP17.09■□□□□ 0.33
CLN6-215ENST00000636674 IQCB1Q15051 598 aa17.09■□□□□ 0.33
CLN6-215ENST00000636674 SYCP1Q15431 976 aa17.09■□□□□ 0.33
CLN6-215ENST00000636674 TTC5Q8N0Z6 440 aa17.09■□□□□ 0.33
CLN6-215ENST00000636674 TSC1Q92574 1164 aa17.09■□□□□ 0.33
CLN6-215ENST00000636674 DDX60Q8IY21 1712 aaKnown RBP17.09■□□□□ 0.33
CLN6-215ENST00000636674 A0A087WZG4 1122 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms