RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 KIAA1328Q86T90 577 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 TMEM110Q86TL2 294 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 ANKRD18AQ8IVF6 992 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 DHX36Q9H2U1 1008 aaKnown RBP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 FHOD3Q2V2M9 1422 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 ARHGEF5Q12774 1597 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 MYBBP1AQ9BQG0 1328 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 SLC26A4O43511 780 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 PRC1O43663 620 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 GBP2P32456 591 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 NF2P35240 595 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 POLR2FP61218 127 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 MRPL28Q13084 256 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 SUGP1Q8IWZ8 645 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 TMCO5AQ8N6Q1 288 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 TBC1D32Q96NH3 1257 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 STK31Q9BXU1 1019 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 SPC25Q9HBM1 224 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 CD248Q9HCU0 757 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 SEPT11Q9NVA2 429 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 CARMIL2Q6F5E8 1435 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 KIF15Q9NS87 1388 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 KDM5DQ9BY66 1539 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 ANKRD18BA2A2Z9 1011 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 ADD2P35612 726 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 XPCQ01831 940 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 SEPT7Q16181 437 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 E2F4Q16254 413 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 FXNQ16595 210 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 OTUD6AQ7L8S5 288 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 HOOK3Q86VS8 718 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 KRT222Q8N1A0 295 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 ZNF280CQ8ND82 737 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 TBC1D22AQ8WUA7 517 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 SCLT1Q96NL6 688 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 ATG3Q9NT62 314 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 ZNF652Q9Y2D9 606 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 USP19O94966 1318 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 TIMM44O43615 452 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 FCHSD2O94868 740 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 C7P10643 843 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 SNX16P57768 344 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 LEKR1Q6ZMV7 388 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 SCYL1Q96KG9 808 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 SEZ6LQ9BYH1 1024 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 LRRCC1Q9C099 1032 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 OGFRQ9NZT2 677 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 SEPT10Q9P0V9 454 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 SUN2Q9UH99 717 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 MKRN1Q9UHC7 482 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 MKL2Q9ULH7 1088 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 ZNF330Q9Y3S2 320 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 MIA2Q96PC5 1412 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 TIAM1Q13009 1591 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 NEURL4Q96JN8 1562 aa4.49□□□□□ -1.69
R3HDM1-220ENST00000628915 FMN1Q68DA7 1419 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 GOLGA6L10A0A0M3HER8 536 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 PLEKHG3A1L390 1219 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 MYCLP1P12525 358 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 AKNAD1Q5T1N1 836 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 NAIF1Q69YI7 327 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 OLFML1Q6UWY5 402 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 FILIP1Q7Z7B0 1213 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 EPSTI1Q96J88 318 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 NEK1Q96PY6 1258 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 INTUQ9ULD6 942 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 RRP15Q9Y3B9 282 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 LRRC9Q6ZRR7 1453 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 WDFY3Q8IZQ1 3526 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 GCKP35557 465 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 NMIQ13287 307 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 DHX8Q14562 1220 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 RABEP1Q15276 862 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 RNF20Q5VTR2 975 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 GBP6Q6ZN66 633 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 NUTM1Q86Y26 1132 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 SAMD14Q8IZD0 417 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 N4BP2L2Q92802 583 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 DDX27Q96GQ7 796 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 SLC39A3Q9BRY0 314 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 FBXL5Q9UKA1 691 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 LIMCH1Q9UPQ0 1083 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 LRRFIP2Q9Y608 721 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 DHX29Q7Z478 1369 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 TBCAO75347 108 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 HSPA4P34932 840 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 RANBP1P43487 201 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 DMPKQ09013 629 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 WTAPQ15007 396 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 ASTLQ6HA08 431 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 NAA16Q6N069 864 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 LLGL2Q6P1M3 1020 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 MAMSTRQ6ZN01 415 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 NGDNQ8NEJ9 315 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 CENPTQ96BT3 561 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 SH3GL1Q99961 368 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 TEX13AQ9BXU3 409 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 RETREG1Q9H6L5 497 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 TMEM63CQ9P1W3 806 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms