RNA–Protein interactions for RNA: ENST00000627241.1

RBM12B-208, Transcript of RNA binding motif protein 12B, human

APPRIS ALT2 TSL 2 BASIC

Gene RBM12B, Length 2,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM12B-208	ENST00000627241	TTLL5	Q6EMB2	1281 aa		13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	STOX1	Q6ZVD7	989 aa		13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	CCDC83	Q8IWF9	413 aa		13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	NKX2-3	Q8TAU0	364 aa		13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	PAG1	Q9NWQ8	432 aa		13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	CAMTA2	O94983	1202 aa		13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	IL6ST	P40189	918 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	IFIT5	Q13325	482 aa	Known RBP	13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	ME3	Q16798	604 aa		13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	ZNF34	Q8IZ26	560 aa		13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	CCDC87	Q9NVE4	849 aa		13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	TPCN1	Q9ULQ1	816 aa		13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	RIPOR2	Q9Y4F9	1068 aa		13.73	□□□□□ -0.21
RBM12B-208	ENST00000627241	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.72	□□□□□ -0.21
RBM12B-208	ENST00000627241	FOXP2	O15409	715 aa		13.72	□□□□□ -0.21
RBM12B-208	ENST00000627241	CYP21A2	P08686	494 aa		13.72	□□□□□ -0.21
RBM12B-208	ENST00000627241	LDHAL6A	Q6ZMR3	332 aa		13.72	□□□□□ -0.21
RBM12B-208	ENST00000627241	LAMA4	Q16363	1823 aa		13.72	□□□□□ -0.21
RBM12B-208	ENST00000627241		M0R2C6	588 aa		13.72	□□□□□ -0.21
RBM12B-208	ENST00000627241	IFIT1	P09914	478 aa	Known RBP	13.72	□□□□□ -0.21
RBM12B-208	ENST00000627241	ZAP70	P43403	619 aa		13.72	□□□□□ -0.21
RBM12B-208	ENST00000627241	KBTBD3	Q8NAB2	608 aa		13.72	□□□□□ -0.21
RBM12B-208	ENST00000627241	RUFY2	Q8WXA3	655 aa		13.72	□□□□□ -0.21
RBM12B-208	ENST00000627241	CEP126	Q9P2H0	1117 aa		13.72	□□□□□ -0.21
RBM12B-208	ENST00000627241	RBM27	Q9P2N5	1060 aa	Known RBP	13.72	□□□□□ -0.21
RBM12B-208	ENST00000627241	TAF7L	Q5H9L4	462 aa		13.71	□□□□□ -0.21
RBM12B-208	ENST00000627241	KCNB2	Q92953	911 aa		13.71	□□□□□ -0.21
RBM12B-208	ENST00000627241	OSBP2	Q969R2	916 aa		13.71	□□□□□ -0.21
RBM12B-208	ENST00000627241	ZSWIM6	Q9HCJ5	1215 aa		13.71	□□□□□ -0.21
RBM12B-208	ENST00000627241	RTN4	Q9NQC3	1192 aa	Known RBP	13.71	□□□□□ -0.21
RBM12B-208	ENST00000627241	BICDL1	Q6ZP65	573 aa		13.71	□□□□□ -0.22
RBM12B-208	ENST00000627241	VGLL2	Q8N8G2	317 aa		13.71	□□□□□ -0.22
RBM12B-208	ENST00000627241	PLA2G12B	Q9BX93	195 aa		13.71	□□□□□ -0.22
RBM12B-208	ENST00000627241	PDRG1	Q9NUG6	133 aa		13.71	□□□□□ -0.22
RBM12B-208	ENST00000627241	LMBRD1	Q9NUN5	540 aa		13.71	□□□□□ -0.22
RBM12B-208	ENST00000627241	DENND2A	Q9ULE3	1009 aa		13.71	□□□□□ -0.22
RBM12B-208	ENST00000627241	PRPF40A	O75400	957 aa	Known RBP	13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	MCAM	P43121	646 aa		13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	STK3	Q13188	491 aa		13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	CHST3	Q7LGC8	479 aa		13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	NWD2	Q9ULI1	1742 aa		13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	MAST3	O60307	1309 aa		13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	TOB2	Q14106	344 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	METTL24	Q5JXM2	366 aa		13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	BARGIN	Q6ZT62	677 aa		13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	GPT2	Q8TD30	523 aa		13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	SRP68	Q9UHB9	627 aa	Known RBP	13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	THRAP3	Q9Y2W1	955 aa	Known RBP	13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	JCAD	Q9P266	1359 aa		13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	DDX60	Q8IY21	1712 aa	Known RBP	13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	SRCAP	Q6ZRS2	3230 aa		13.7	□□□□□ -0.22
RBM12B-208	ENST00000627241	CIAO1	O76071	339 aa		13.69	□□□□□ -0.22
RBM12B-208	ENST00000627241	BRD1	O95696	1058 aa		13.69	□□□□□ -0.22
RBM12B-208	ENST00000627241	PHKA1	P46020	1223 aa		13.69	□□□□□ -0.22
RBM12B-208	ENST00000627241	GBP4	Q96PP9	640 aa		13.69	□□□□□ -0.22
RBM12B-208	ENST00000627241	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
RBM12B-208	ENST00000627241	DDX11L8	A8MPP1	907 aa		13.69	□□□□□ -0.22
RBM12B-208	ENST00000627241	PUS7L	Q9H0K6	701 aa	Known RBP	13.69	□□□□□ -0.22
RBM12B-208	ENST00000627241	GPHN	Q9NQX3	736 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM12B-208	ENST00000627241	CNNM1	Q9NRU3	951 aa		13.69	□□□□□ -0.22
RBM12B-208	ENST00000627241	XRCC6	P12956	609 aa	Known RBP eCLIP	13.68	□□□□□ -0.22	2e-10	■□□□□ 11.3
RBM12B-208	ENST00000627241	LIMCH1	Q9UPQ0	1083 aa		13.68	□□□□□ -0.22
RBM12B-208	ENST00000627241	CDHR2	Q9BYE9	1310 aa		13.68	□□□□□ -0.22
RBM12B-208	ENST00000627241	COL5A3	P25940	1745 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM12B-208	ENST00000627241	ATP2B3	Q16720	1220 aa		13.68	□□□□□ -0.22
RBM12B-208	ENST00000627241	MCMDC2	Q4G0Z9	681 aa		13.68	□□□□□ -0.22
RBM12B-208	ENST00000627241	CLEC17A	Q6ZS10	378 aa		13.68	□□□□□ -0.22
RBM12B-208	ENST00000627241	EIF5B	O60841	1220 aa	Known RBP	13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	GADD45B	O75293	160 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	HAND2	P61296	217 aa		13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	NUCB2	P80303	420 aa		13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	FAM173B	Q6P4H8	233 aa		13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	GPR108	Q9NPR9	543 aa		13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	CYP46A1	Q9Y6A2	500 aa		13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	CASZ1	Q86V15	1759 aa		13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	NTSR2	O95665	410 aa		13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	GORAB	Q5T7V8	394 aa		13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	USPL1	Q5W0Q7	1092 aa		13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	BCL2L12	Q9HB09	334 aa		13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	CWC22	Q9HCG8	908 aa	Known RBP	13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	USP21	Q9UK80	565 aa		13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	DDX49	Q9Y6V7	483 aa	Known RBP	13.67	□□□□□ -0.22
RBM12B-208	ENST00000627241	ERVV-1	B6SEH8	477 aa		13.66	□□□□□ -0.22
RBM12B-208	ENST00000627241	PDE8A	O60658	829 aa		13.66	□□□□□ -0.22
RBM12B-208	ENST00000627241	HSPD1	P10809	573 aa	Known RBP	13.66	□□□□□ -0.22
RBM12B-208	ENST00000627241	NCL	P19338	710 aa	Known RBP	13.66	□□□□□ -0.22
RBM12B-208	ENST00000627241	SYT1	P21579	422 aa		13.66	□□□□□ -0.22
RBM12B-208	ENST00000627241	TTC39A	Q5SRH9	613 aa		13.66	□□□□□ -0.22
RBM12B-208	ENST00000627241	ZMYM1	Q5SVZ6	1142 aa		13.66	□□□□□ -0.22
RBM12B-208	ENST00000627241	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM12B-208	ENST00000627241	PIH1D3	Q9NQM4	214 aa	Known RBP	13.66	□□□□□ -0.22
RBM12B-208	ENST00000627241	FSD2	A1L4K1	749 aa		13.66	□□□□□ -0.22
RBM12B-208	ENST00000627241	ANKRD18B	A2A2Z9	1011 aa		13.66	□□□□□ -0.22
RBM12B-208	ENST00000627241	BTAF1	O14981	1849 aa		13.66	□□□□□ -0.22
RBM12B-208	ENST00000627241	EPB41L2	O43491	1005 aa	Known RBP	13.65	□□□□□ -0.22
RBM12B-208	ENST00000627241	ZKSCAN1	P17029	563 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM12B-208	ENST00000627241	GJB2	P29033	226 aa		13.65	□□□□□ -0.22
RBM12B-208	ENST00000627241	VPS72	Q15906	364 aa		13.65	□□□□□ -0.22
RBM12B-208	ENST00000627241	CAVIN1	Q6NZI2	390 aa	Known RBP	13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms