RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 BSDC1Q9NW68 430 aaPredicted RBP13.8□□□□□ -0.2
SSBP4-215ENST00000625926 ANKRD36CQ5JPF3 1778 aa13.8□□□□□ -0.2
SSBP4-215ENST00000625926 F6X3S4 739 aa13.79□□□□□ -0.2
SSBP4-215ENST00000625926 ECE2O60344 883 aa13.79□□□□□ -0.2
SSBP4-215ENST00000625926 CASP7P55210 303 aa13.79□□□□□ -0.2
SSBP4-215ENST00000625926 BEND3Q5T5X7 828 aa13.79□□□□□ -0.2
SSBP4-215ENST00000625926 GPR101Q96P66 508 aaPredicted RBP13.79□□□□□ -0.2
SSBP4-215ENST00000625926 CNOT7Q9UIV1 285 aaKnown RBP13.79□□□□□ -0.2
SSBP4-215ENST00000625926 XDHP47989 1333 aa13.79□□□□□ -0.2
SSBP4-215ENST00000625926 RTL9Q8NET4 1388 aa13.79□□□□□ -0.2
SSBP4-215ENST00000625926 CACNA1SQ13698 1873 aa13.78□□□□□ -0.2
SSBP4-215ENST00000625926 DICER1Q9UPY3 1922 aaKnown RBP13.78□□□□□ -0.2
SSBP4-215ENST00000625926 E9PSI1 815 aa13.78□□□□□ -0.2
SSBP4-215ENST00000625926 H7C1D1 291 aa13.78□□□□□ -0.2
SSBP4-215ENST00000625926 PSMD14O00487 310 aa13.78□□□□□ -0.2
SSBP4-215ENST00000625926 CSF1RP07333 972 aa13.78□□□□□ -0.2
SSBP4-215ENST00000625926 ATP2B4P23634 1241 aa13.78□□□□□ -0.2
SSBP4-215ENST00000625926 IGHMBP2P38935 993 aaKnown RBP13.78□□□□□ -0.2
SSBP4-215ENST00000625926 DPF2Q92785 391 aa13.78□□□□□ -0.2
SSBP4-215ENST00000625926 MKRN1Q9UHC7 482 aaKnown RBP13.78□□□□□ -0.2
SSBP4-215ENST00000625926 MINPP1Q9UNW1 487 aa13.78□□□□□ -0.2
SSBP4-215ENST00000625926 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
SSBP4-215ENST00000625926 CCER2I3L3R5 266 aa13.77□□□□□ -0.21
SSBP4-215ENST00000625926 ITGA6P23229 1130 aa13.77□□□□□ -0.21
SSBP4-215ENST00000625926 RPS12P25398 132 aaKnown RBP13.77□□□□□ -0.21
SSBP4-215ENST00000625926 ZC3H15Q8WU90 426 aaKnown RBP13.77□□□□□ -0.21
SSBP4-215ENST00000625926 KCNQ5Q9NR82 932 aa13.77□□□□□ -0.21
SSBP4-215ENST00000625926 DUOX1Q9NRD9 1551 aa13.76□□□□□ -0.21
SSBP4-215ENST00000625926 MICALL2Q8IY33 904 aa13.76□□□□□ -0.21
SSBP4-215ENST00000625926 MPHOSPH8Q99549 860 aa13.76□□□□□ -0.21
SSBP4-215ENST00000625926 PGAP2Q9UHJ9 254 aa13.76□□□□□ -0.21
SSBP4-215ENST00000625926 CCDC88AQ3V6T2 1871 aa13.76□□□□□ -0.21
SSBP4-215ENST00000625926 ALDH1L1O75891 902 aa13.75□□□□□ -0.21
SSBP4-215ENST00000625926 VIL1P09327 827 aaKnown RBP13.75□□□□□ -0.21
SSBP4-215ENST00000625926 HIRAP54198 1017 aaPredicted RBP13.75□□□□□ -0.21
SSBP4-215ENST00000625926 SLFN5Q08AF3 891 aa13.75□□□□□ -0.21
SSBP4-215ENST00000625926 FAM161AQ3B820 660 aa13.75□□□□□ -0.21
SSBP4-215ENST00000625926 SLC4A10Q6U841 1118 aa13.75□□□□□ -0.21
SSBP4-215ENST00000625926 PODNQ7Z5L7 613 aa13.75□□□□□ -0.21
SSBP4-215ENST00000625926 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
SSBP4-215ENST00000625926 C9orf78Q9NZ63 289 aaPredicted RBP13.75□□□□□ -0.21
SSBP4-215ENST00000625926 SCN4AP35499 1836 aa13.75□□□□□ -0.21
SSBP4-215ENST00000625926 DDX60Q8IY21 1712 aaKnown RBP13.75□□□□□ -0.21
SSBP4-215ENST00000625926 CNTNAP1P78357 1384 aa13.74□□□□□ -0.21
SSBP4-215ENST00000625926 SHTN1A0MZ66 631 aa13.74□□□□□ -0.21
SSBP4-215ENST00000625926 ANKRD18BA2A2Z9 1011 aa13.74□□□□□ -0.21
SSBP4-215ENST00000625926 GRM8O00222 908 aa13.74□□□□□ -0.21
SSBP4-215ENST00000625926 CCT4P50991 539 aaKnown RBP13.74□□□□□ -0.21
SSBP4-215ENST00000625926 FOXO4P98177 505 aa13.74□□□□□ -0.21
SSBP4-215ENST00000625926 MRPL50Q8N5N7 158 aaKnown RBP13.74□□□□□ -0.21
SSBP4-215ENST00000625926 TRPM4Q8TD43 1214 aa13.74□□□□□ -0.21
SSBP4-215ENST00000625926 SRCIN1Q9C0H9 1055 aa13.74□□□□□ -0.21
SSBP4-215ENST00000625926 LEMD3Q9Y2U8 911 aa13.74□□□□□ -0.21
SSBP4-215ENST00000625926 COL4A1P02462 1669 aa13.74□□□□□ -0.21
SSBP4-215ENST00000625926 WTIPA6NIX2 430 aaPredicted RBP13.73□□□□□ -0.21
SSBP4-215ENST00000625926 RASSF10A6NK89 507 aa13.73□□□□□ -0.21
SSBP4-215ENST00000625926 TRAF5O00463 557 aa13.73□□□□□ -0.21
SSBP4-215ENST00000625926 FMR1Q06787 632 aaKnown RBP eCLIP13.73□□□□□ -0.21
SSBP4-215ENST00000625926 IFIT5Q13325 482 aaKnown RBP13.73□□□□□ -0.21
SSBP4-215ENST00000625926 DEFB115Q30KQ5 88 aa13.73□□□□□ -0.21
SSBP4-215ENST00000625926 CDC37L1Q7L3B6 337 aa13.73□□□□□ -0.21
SSBP4-215ENST00000625926 SAMD7Q7Z3H4 446 aa13.73□□□□□ -0.21
SSBP4-215ENST00000625926 ABT1Q9ULW3 272 aaKnown RBP13.73□□□□□ -0.21
SSBP4-215ENST00000625926 LAMB2P55268 1798 aa13.73□□□□□ -0.21
SSBP4-215ENST00000625926 VEGFBP49765 207 aa13.72□□□□□ -0.21
SSBP4-215ENST00000625926 TBC1D10BQ4KMP7 808 aaPredicted RBP13.72□□□□□ -0.21
SSBP4-215ENST00000625926 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
SSBP4-215ENST00000625926 CST9Q5W186 159 aa13.72□□□□□ -0.21
SSBP4-215ENST00000625926 RSBN1LQ6PCB5 846 aaPredicted RBP13.72□□□□□ -0.21
SSBP4-215ENST00000625926 LMBR1LQ6UX01 489 aa13.72□□□□□ -0.21
SSBP4-215ENST00000625926 AGBL3Q8NEM8 1001 aa13.72□□□□□ -0.21
SSBP4-215ENST00000625926 CDCA7LQ96GN5 454 aa13.72□□□□□ -0.21
SSBP4-215ENST00000625926 GLIS2Q9BZE0 524 aaPredicted RBP13.72□□□□□ -0.21
SSBP4-215ENST00000625926 CHMP3Q9Y3E7 222 aa13.72□□□□□ -0.21
SSBP4-215ENST00000625926 MED23Q9ULK4 1368 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 ZNF804BA4D1E1 1349 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 PTPRCP08575 1304 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 LRRC37AA6NMS7 1700 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 LTBP1Q14766 1721 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 USP17L3A6NCW0 530 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 USP17L4A6NCW7 530 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 HSPA1AP0DMV8 641 aaKnown RBP13.71□□□□□ -0.21
SSBP4-215ENST00000625926 HSPA1BP0DMV9 641 aaKnown RBP13.71□□□□□ -0.21
SSBP4-215ENST00000625926 CHRNDQ07001 517 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 CCDC57Q2TAC2 916 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 EPHA10Q5JZY3 1008 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 USP17L1Q7RTZ2 530 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 SSH1Q8WYL5 1049 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 COA1Q9GZY4 146 aa13.71□□□□□ -0.21
SSBP4-215ENST00000625926 ADAMTSL1Q8N6G6 1762 aa13.71□□□□□ -0.22
SSBP4-215ENST00000625926 CELF2O95319 508 aaKnown RBP13.7□□□□□ -0.22
SSBP4-215ENST00000625926 EGFRP00533 1210 aa13.7□□□□□ -0.22
SSBP4-215ENST00000625926 KCNJ4P48050 445 aa13.7□□□□□ -0.22
SSBP4-215ENST00000625926 ALDH1L2Q3SY69 923 aa13.7□□□□□ -0.22
SSBP4-215ENST00000625926 USP48Q86UV5 1035 aa13.7□□□□□ -0.22
SSBP4-215ENST00000625926 TRMT2AQ8IZ69 625 aaKnown RBP13.7□□□□□ -0.22
SSBP4-215ENST00000625926 DCPSQ96C86 337 aaKnown RBP13.7□□□□□ -0.22
SSBP4-215ENST00000625926 USP17L8P0C7I0 530 aa13.69□□□□□ -0.22
SSBP4-215ENST00000625926 ZNF280AP59817 542 aaPredicted RBP13.69□□□□□ -0.22
SSBP4-215ENST00000625926 KIF4BQ2VIQ3 1234 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms