RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 GSCP56915 257 aaPredicted RBP14.62□□□□□ -0.07
LITAF-221ENST00000622633 UBE2HP62256 183 aa14.62□□□□□ -0.07
LITAF-221ENST00000622633 NMIQ13287 307 aaPredicted RBP14.62□□□□□ -0.07
LITAF-221ENST00000622633 KCNB2Q92953 911 aa14.62□□□□□ -0.07
LITAF-221ENST00000622633 CCDC171Q6TFL3 1326 aa14.62□□□□□ -0.07
LITAF-221ENST00000622633 HEG1Q9ULI3 1381 aa14.62□□□□□ -0.07
LITAF-221ENST00000622633 DNM1Q05193 864 aaKnown RBP14.61□□□□□ -0.07
LITAF-221ENST00000622633 ST3GAL1Q11201 340 aa14.61□□□□□ -0.07
LITAF-221ENST00000622633 COL9A3Q14050 684 aaPredicted RBP14.61□□□□□ -0.07
LITAF-221ENST00000622633 ME3Q16798 604 aa14.61□□□□□ -0.07
LITAF-221ENST00000622633 CREB3L3Q68CJ9 461 aa14.61□□□□□ -0.07
LITAF-221ENST00000622633 TM6SF1Q9BZW5 370 aa14.61□□□□□ -0.07
LITAF-221ENST00000622633 MTMR6Q9Y217 621 aa14.61□□□□□ -0.07
LITAF-221ENST00000622633 TCHHQ07283 1943 aa14.61□□□□□ -0.07
LITAF-221ENST00000622633 ADGRL3Q9HAR2 1447 aa14.61□□□□□ -0.07
LITAF-221ENST00000622633 ATP2B1P20020 1258 aa14.61□□□□□ -0.07
LITAF-221ENST00000622633 SLC39A6Q13433 755 aa14.61□□□□□ -0.07
LITAF-221ENST00000622633 PDIA6Q15084 440 aa14.61□□□□□ -0.07
LITAF-221ENST00000622633 KLHDC4Q8TBB5 520 aa14.61□□□□□ -0.07
LITAF-221ENST00000622633 ZSCAN31Q96LW9 406 aaPredicted RBP14.61□□□□□ -0.07
LITAF-221ENST00000622633 BOLA2Q9H3K6 86 aa14.61□□□□□ -0.07
LITAF-221ENST00000622633 DDX21Q9NR30 783 aaKnown RBP eCLIP14.61□□□□□ -0.07
LITAF-221ENST00000622633 ZKSCAN1P17029 563 aaPredicted RBP14.6□□□□□ -0.07
LITAF-221ENST00000622633 RIC3Q7Z5B4 369 aa14.6□□□□□ -0.07
LITAF-221ENST00000622633 FAM212AQ96EL1 285 aa14.6□□□□□ -0.07
LITAF-221ENST00000622633 PYCARDQ9ULZ3 195 aa14.6□□□□□ -0.07
LITAF-221ENST00000622633 ATP6V1DQ9Y5K8 247 aa14.6□□□□□ -0.07
LITAF-221ENST00000622633 LMO7Q8WWI1 1683 aa14.6□□□□□ -0.07
LITAF-221ENST00000622633 DDX58O95786 925 aaKnown RBP14.6□□□□□ -0.07
LITAF-221ENST00000622633 IGKV5-2P06315 115 aa14.6□□□□□ -0.07
LITAF-221ENST00000622633 ZNF397Q8NF99 534 aaPredicted RBP14.6□□□□□ -0.07
LITAF-221ENST00000622633 TPCN1Q9ULQ1 816 aa14.6□□□□□ -0.07
LITAF-221ENST00000622633 VPS37CA5D8V6 355 aaPredicted RBP14.59□□□□□ -0.07
LITAF-221ENST00000622633 HCLS1P14317 486 aaPredicted RBP14.59□□□□□ -0.07
LITAF-221ENST00000622633 MYL6BP14649 208 aa14.59□□□□□ -0.07
LITAF-221ENST00000622633 NEK11Q8NG66 645 aa14.59□□□□□ -0.07
LITAF-221ENST00000622633 MAP4K1Q92918 833 aa14.59□□□□□ -0.07
LITAF-221ENST00000622633 SH2B1Q9NRF2 756 aaPredicted RBP14.59□□□□□ -0.07
LITAF-221ENST00000622633 USP25Q9UHP3 1055 aa14.59□□□□□ -0.07
LITAF-221ENST00000622633 SLC27A2O14975 620 aa14.59□□□□□ -0.07
LITAF-221ENST00000622633 GIMAP6Q6P9H5 292 aa14.59□□□□□ -0.07
LITAF-221ENST00000622633 UTYO14607 1347 aa14.59□□□□□ -0.07
LITAF-221ENST00000622633 NCAPD2Q15021 1401 aa14.59□□□□□ -0.07
LITAF-221ENST00000622633 CRYBG1Q9Y4K1 1723 aa14.59□□□□□ -0.07
LITAF-221ENST00000622633 A0A0D9SFI3 127 aa14.58□□□□□ -0.07
LITAF-221ENST00000622633 UVSSAQ2YD98 709 aa14.58□□□□□ -0.07
LITAF-221ENST00000622633 FAM184AQ8NB25 1140 aa14.58□□□□□ -0.07
LITAF-221ENST00000622633 TCEANC2Q96MN5 208 aa14.58□□□□□ -0.07
LITAF-221ENST00000622633 FSD1Q9BTV5 496 aa14.58□□□□□ -0.07
LITAF-221ENST00000622633 SMTNL1A8MU46 457 aa14.58□□□□□ -0.08
LITAF-221ENST00000622633 KRBA2Q6ZNG9 492 aa14.58□□□□□ -0.08
LITAF-221ENST00000622633 TAF6LQ9Y6J9 622 aa14.58□□□□□ -0.08
LITAF-221ENST00000622633 HIP1O00291 1037 aa14.57□□□□□ -0.08
LITAF-221ENST00000622633 EPHA10Q5JZY3 1008 aa14.57□□□□□ -0.08
LITAF-221ENST00000622633 KCNF1Q9H3M0 494 aa14.57□□□□□ -0.08
LITAF-221ENST00000622633 ADCY5O95622 1261 aa14.57□□□□□ -0.08
LITAF-221ENST00000622633 ZC3H6P61129 1189 aaKnown RBP14.57□□□□□ -0.08
LITAF-221ENST00000622633 LARP1Q6PKG0 1096 aaKnown RBP14.57□□□□□ -0.08
LITAF-221ENST00000622633 PACS2Q86VP3 889 aa14.57□□□□□ -0.08
LITAF-221ENST00000622633 MNS1Q8NEH6 495 aa14.57□□□□□ -0.08
LITAF-221ENST00000622633 XAGE3Q8WTP9 111 aa14.57□□□□□ -0.08
LITAF-221ENST00000622633 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
LITAF-221ENST00000622633 BORCS6Q96GS4 357 aa14.57□□□□□ -0.08
LITAF-221ENST00000622633 CHD2O14647 1828 aaKnown RBP14.57□□□□□ -0.08
LITAF-221ENST00000622633 NEURL1BA8MQ27 555 aa14.56□□□□□ -0.08
LITAF-221ENST00000622633 LARP1BQ659C4 914 aaKnown RBP14.56□□□□□ -0.08
LITAF-221ENST00000622633 ZNF790Q6PG37 636 aa14.56□□□□□ -0.08
LITAF-221ENST00000622633 COPS6Q7L5N1 327 aa14.56□□□□□ -0.08
LITAF-221ENST00000622633 CCDC91Q7Z6B0 441 aa14.56□□□□□ -0.08
LITAF-221ENST00000622633 MYD88Q99836 296 aa14.56□□□□□ -0.08
LITAF-221ENST00000622633 A0A1B0GUL7 405 aa14.56□□□□□ -0.08
LITAF-221ENST00000622633 PSMA5P28066 241 aa14.56□□□□□ -0.08
LITAF-221ENST00000622633 KRT28Q7Z3Y7 464 aa14.56□□□□□ -0.08
LITAF-221ENST00000622633 SRLQ86TD4 932 aa14.56□□□□□ -0.08
LITAF-221ENST00000622633 FERMT3Q86UX7 667 aa14.56□□□□□ -0.08
LITAF-221ENST00000622633 OVOS2A0A0G2JMS6 1433 aa14.56□□□□□ -0.08
LITAF-221ENST00000622633 PIP4K2AP48426 406 aaPredicted RBP14.55□□□□□ -0.08
LITAF-221ENST00000622633 NEXNQ0ZGT2 675 aa14.55□□□□□ -0.08
LITAF-221ENST00000622633 FAM173BQ6P4H8 233 aa14.55□□□□□ -0.08
LITAF-221ENST00000622633 NBPF11Q86T75 865 aa14.55□□□□□ -0.08
LITAF-221ENST00000622633 ZNF589Q86UQ0 364 aaPredicted RBP14.55□□□□□ -0.08
LITAF-221ENST00000622633 TXLNBQ8N3L3 684 aa14.55□□□□□ -0.08
LITAF-221ENST00000622633 GCKRQ14397 625 aa14.55□□□□□ -0.08
LITAF-221ENST00000622633 E2F4Q16254 413 aa14.55□□□□□ -0.08
LITAF-221ENST00000622633 BLOC1S2Q6QNY1 142 aa14.55□□□□□ -0.08
LITAF-221ENST00000622633 CHMP3Q9Y3E7 222 aa14.55□□□□□ -0.08
LITAF-221ENST00000622633 PLCB2Q00722 1185 aa14.54□□□□□ -0.08
LITAF-221ENST00000622633 BMS1Q14692 1282 aaKnown RBP14.54□□□□□ -0.08
LITAF-221ENST00000622633 NBPF10Q6P3W6 841 aaKnown RBP14.54□□□□□ -0.08
LITAF-221ENST00000622633 FBXO38Q6PIJ6 1188 aa14.54□□□□□ -0.08
LITAF-221ENST00000622633 CDC37L1Q7L3B6 337 aa14.54□□□□□ -0.08
LITAF-221ENST00000622633 GOLGA6L1Q8N7Z2 621 aa14.54□□□□□ -0.08
LITAF-221ENST00000622633 CCDC191Q8NCU4 936 aa14.54□□□□□ -0.08
LITAF-221ENST00000622633 FUCA2Q9BTY2 467 aa14.54□□□□□ -0.08
LITAF-221ENST00000622633 SNRKQ9NRH2 765 aa14.54□□□□□ -0.08
LITAF-221ENST00000622633 NBPF9Q3BBW0 867 aa14.54□□□□□ -0.08
LITAF-221ENST00000622633 SWT1Q5T5J6 900 aaKnown RBP14.54□□□□□ -0.08
LITAF-221ENST00000622633 DEF6Q9H4E7 631 aa14.54□□□□□ -0.08
LITAF-221ENST00000622633 SLC52A2Q9HAB3 445 aa14.54□□□□□ -0.08
LITAF-221ENST00000622633 NLRP2Q9NX02 1062 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms