RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 CRY2Q49AN0 593 aa17.4■□□□□ 0.38
CLTCL1-212ENST00000622493 CCDC24Q8N4L8 307 aa17.4■□□□□ 0.38
CLTCL1-212ENST00000622493 ZNF609O15014 1411 aa17.39■□□□□ 0.37
CLTCL1-212ENST00000622493 A0A1B0GUL7 405 aa17.39■□□□□ 0.37
CLTCL1-212ENST00000622493 KLRG2A4D1S0 409 aaPredicted RBP17.39■□□□□ 0.37
CLTCL1-212ENST00000622493 VGLL2Q8N8G2 317 aa17.39■□□□□ 0.37
CLTCL1-212ENST00000622493 BRIP1Q9BX63 1249 aa17.39■□□□□ 0.37
CLTCL1-212ENST00000622493 DBNLQ9UJU6 430 aaKnown RBP17.39■□□□□ 0.37
CLTCL1-212ENST00000622493 TNRC6CQ9HCJ0 1690 aaKnown RBP17.39■□□□□ 0.37
CLTCL1-212ENST00000622493 RPS8P62241 208 aaKnown RBP17.38■□□□□ 0.37
CLTCL1-212ENST00000622493 UPF1Q92900 1129 aaKnown RBP eCLIP17.38■□□□□ 0.37
CLTCL1-212ENST00000622493 SDSP20132 328 aa17.38■□□□□ 0.37
CLTCL1-212ENST00000622493 TSHZ3Q63HK5 1081 aa17.38■□□□□ 0.37
CLTCL1-212ENST00000622493 NEUROD6Q96NK8 337 aa17.38■□□□□ 0.37
CLTCL1-212ENST00000622493 TLR7Q9NYK1 1049 aaKnown RBP17.38■□□□□ 0.37
CLTCL1-212ENST00000622493 EIF5BO60841 1220 aaKnown RBP17.37■□□□□ 0.37
CLTCL1-212ENST00000622493 TIMM10P62072 90 aa17.37■□□□□ 0.37
CLTCL1-212ENST00000622493 CELF1Q92879 486 aaKnown RBP17.37■□□□□ 0.37
CLTCL1-212ENST00000622493 DBNDD2Q9BQY9 259 aa17.37■□□□□ 0.37
CLTCL1-212ENST00000622493 CDC45O75419 566 aa17.36■□□□□ 0.37
CLTCL1-212ENST00000622493 ATP5JP18859 108 aa17.36■□□□□ 0.37
CLTCL1-212ENST00000622493 PUM3Q15397 648 aaKnown RBP17.36■□□□□ 0.37
CLTCL1-212ENST00000622493 ATP2B3Q16720 1220 aa17.36■□□□□ 0.37
CLTCL1-212ENST00000622493 MSL1Q68DK7 614 aa17.36■□□□□ 0.37
CLTCL1-212ENST00000622493 RPGRQ92834 1020 aaKnown RBP17.36■□□□□ 0.37
CLTCL1-212ENST00000622493 HOXA10P31260 410 aaPredicted RBP17.35■□□□□ 0.37
CLTCL1-212ENST00000622493 PDE6BP35913 854 aa17.35■□□□□ 0.37
CLTCL1-212ENST00000622493 CHRNDQ07001 517 aa17.35■□□□□ 0.37
CLTCL1-212ENST00000622493 GRAPQ13588 217 aa17.35■□□□□ 0.37
CLTCL1-212ENST00000622493 GRAPLQ8TC17 118 aaPredicted RBP17.35■□□□□ 0.37
CLTCL1-212ENST00000622493 LPIN2Q92539 896 aa17.35■□□□□ 0.37
CLTCL1-212ENST00000622493 RBM17Q96I25 401 aaKnown RBP17.35■□□□□ 0.37
CLTCL1-212ENST00000622493 SPEF2Q9C093 1822 aa17.35■□□□□ 0.37
CLTCL1-212ENST00000622493 TRIM6-TRIM34B2RNG4 842 aa17.35■□□□□ 0.37
CLTCL1-212ENST00000622493 CASC1Q6TDU7 716 aa17.35■□□□□ 0.37
CLTCL1-212ENST00000622493 CNTROBQ8N137 903 aa17.35■□□□□ 0.37
CLTCL1-212ENST00000622493 FGFR2P21802 821 aa17.34■□□□□ 0.37
CLTCL1-212ENST00000622493 CCDC158Q5M9N0 1113 aa17.34■□□□□ 0.37
CLTCL1-212ENST00000622493 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLTCL1-212ENST00000622493 XAGE2Q96GT9 111 aa17.34■□□□□ 0.37
CLTCL1-212ENST00000622493 CRAMP1Q96RY5 1269 aa17.34■□□□□ 0.37
CLTCL1-212ENST00000622493 MINPP1Q9UNW1 487 aa17.34■□□□□ 0.37
CLTCL1-212ENST00000622493 TAF1P21675 1872 aa17.34■□□□□ 0.37
CLTCL1-212ENST00000622493 RILPL2Q969X0 211 aa17.33■□□□□ 0.37
CLTCL1-212ENST00000622493 ANKRD2Q9GZV1 360 aa17.33■□□□□ 0.37
CLTCL1-212ENST00000622493 COL4A1P02462 1669 aa17.33■□□□□ 0.36
CLTCL1-212ENST00000622493 SLC5A1P13866 664 aa17.33■□□□□ 0.36
CLTCL1-212ENST00000622493 GORABQ5T7V8 394 aa17.33■□□□□ 0.36
CLTCL1-212ENST00000622493 TBC1D9Q6ZT07 1266 aa17.33■□□□□ 0.36
CLTCL1-212ENST00000622493 EVI5LQ96CN4 794 aa17.33■□□□□ 0.36
CLTCL1-212ENST00000622493 ANKRD31Q8N7Z5 1873 aa17.32■□□□□ 0.36
CLTCL1-212ENST00000622493 BBOX1O75936 387 aa17.32■□□□□ 0.36
CLTCL1-212ENST00000622493 UBE4AQ14139 1066 aa17.32■□□□□ 0.36
CLTCL1-212ENST00000622493 TMC4Q7Z404 712 aa17.32■□□□□ 0.36
CLTCL1-212ENST00000622493 HELBQ8NG08 1087 aaPredicted RBP17.32■□□□□ 0.36
CLTCL1-212ENST00000622493 ZNF512BQ96KM6 892 aaPredicted RBP17.32■□□□□ 0.36
CLTCL1-212ENST00000622493 TAF5LO75529 589 aa17.31■□□□□ 0.36
CLTCL1-212ENST00000622493 IFIT1P09914 478 aaKnown RBP17.31■□□□□ 0.36
CLTCL1-212ENST00000622493 SRGNP10124 158 aa17.31■□□□□ 0.36
CLTCL1-212ENST00000622493 PDGFDQ9GZP0 370 aaPredicted RBP17.31■□□□□ 0.36
CLTCL1-212ENST00000622493 BOLA2Q9H3K6 86 aa17.31■□□□□ 0.36
CLTCL1-212ENST00000622493 ARAP2Q8WZ64 1704 aa17.31■□□□□ 0.36
CLTCL1-212ENST00000622493 TICAM2Q86XR7 235 aa17.3■□□□□ 0.36
CLTCL1-212ENST00000622493 HAUS7Q99871 368 aa17.3■□□□□ 0.36
CLTCL1-212ENST00000622493 UPF2Q9HAU5 1272 aaKnown RBP17.3■□□□□ 0.36
CLTCL1-212ENST00000622493 AK9Q5TCS8 1911 aa17.3■□□□□ 0.36
CLTCL1-212ENST00000622493 A0A1B0GUL6 1792 aa17.3■□□□□ 0.36
CLTCL1-212ENST00000622493 NPR1P16066 1061 aa17.3■□□□□ 0.36
CLTCL1-212ENST00000622493 ALDH1B1P30837 517 aa17.3■□□□□ 0.36
CLTCL1-212ENST00000622493 TTC39AQ5SRH9 613 aa17.3■□□□□ 0.36
CLTCL1-212ENST00000622493 ADORA1P30542 326 aa17.29■□□□□ 0.36
CLTCL1-212ENST00000622493 MASTLQ96GX5 879 aa17.29■□□□□ 0.36
CLTCL1-212ENST00000622493 SEC24BO95487 1268 aa17.28■□□□□ 0.36
CLTCL1-212ENST00000622493 MAP4K4O95819 1239 aaPredicted RBP17.28■□□□□ 0.36
CLTCL1-212ENST00000622493 UQCRFS1P1P0C7P4 283 aa17.28■□□□□ 0.36
CLTCL1-212ENST00000622493 HIP1O00291 1037 aa17.27■□□□□ 0.36
CLTCL1-212ENST00000622493 CHMLP26374 656 aa17.27■□□□□ 0.36
CLTCL1-212ENST00000622493 CCDC102BQ68D86 513 aa17.27■□□□□ 0.36
CLTCL1-212ENST00000622493 H0YIN7 160 aa17.27■□□□□ 0.35
CLTCL1-212ENST00000622493 ARID4AP29374 1257 aaPredicted RBP17.27■□□□□ 0.35
CLTCL1-212ENST00000622493 MTFR1LQ9H019 292 aa17.27■□□□□ 0.35
CLTCL1-212ENST00000622493 XDHP47989 1333 aa17.26■□□□□ 0.35
CLTCL1-212ENST00000622493 KCNJ4P48050 445 aa17.26■□□□□ 0.35
CLTCL1-212ENST00000622493 DNAJC2Q99543 621 aaKnown RBP17.26■□□□□ 0.35
CLTCL1-212ENST00000622493 LEMD3Q9Y2U8 911 aa17.26■□□□□ 0.35
CLTCL1-212ENST00000622493 RFX7Q2KHR2 1363 aa17.26■□□□□ 0.35
CLTCL1-212ENST00000622493 CAVIN4Q5BKX8 364 aa17.25■□□□□ 0.35
CLTCL1-212ENST00000622493 STYK1Q6J9G0 422 aa17.25■□□□□ 0.35
CLTCL1-212ENST00000622493 SP8Q8IXZ3 490 aa17.25■□□□□ 0.35
CLTCL1-212ENST00000622493 PAG1Q9NWQ8 432 aa17.25■□□□□ 0.35
CLTCL1-212ENST00000622493 ZNF804BA4D1E1 1349 aa17.25■□□□□ 0.35
CLTCL1-212ENST00000622493 SNAP23O00161 211 aa17.24■□□□□ 0.35
CLTCL1-212ENST00000622493 MFAP1P55081 439 aaKnown RBP17.24■□□□□ 0.35
CLTCL1-212ENST00000622493 C2CD5Q86YS7 1000 aa17.24■□□□□ 0.35
CLTCL1-212ENST00000622493 FSD1Q9BTV5 496 aa17.24■□□□□ 0.35
CLTCL1-212ENST00000622493 PODXL2Q9NZ53 605 aa17.24■□□□□ 0.35
CLTCL1-212ENST00000622493 ANKIB1Q9P2G1 1089 aa17.24■□□□□ 0.35
CLTCL1-212ENST00000622493 C10orf71Q711Q0 1435 aa17.24■□□□□ 0.35
CLTCL1-212ENST00000622493 PPEF1O14829 653 aaPredicted RBP17.24■□□□□ 0.35
CLTCL1-212ENST00000622493 ZBTB22O15209 634 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms